RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 FCHO2Q0JRZ9 810 aa13.58□□□□□ -0.23
LMBR1-201ENST00000353442 XKR4Q5GH76 650 aa13.58□□□□□ -0.23
LMBR1-201ENST00000353442 FAM151BQ6UXP7 276 aa13.58□□□□□ -0.23
LMBR1-201ENST00000353442 APTXQ7Z2E3 356 aaKnown RBP13.58□□□□□ -0.23
LMBR1-201ENST00000353442 TAS1R2Q8TE23 839 aa13.58□□□□□ -0.23
LMBR1-201ENST00000353442 TEKT5Q96M29 485 aa13.58□□□□□ -0.23
LMBR1-201ENST00000353442 WRAP53Q9BUR4 548 aaKnown RBP13.58□□□□□ -0.23
LMBR1-201ENST00000353442 GIT1Q9Y2X7 761 aa13.58□□□□□ -0.23
LMBR1-201ENST00000353442 RPTORQ8N122 1335 aa13.58□□□□□ -0.23
LMBR1-201ENST00000353442 ZNF432O94892 652 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 SEC24CP53992 1094 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 CRADDP78560 199 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 CDH17Q12864 832 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 ZCCHC23Q6ZST2 131 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TMPRSS9Q7Z410 1059 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 DEFB107AQ8IZN7 70 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 C3orf20Q8ND61 904 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 ZFP28Q8NHY6 868 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 PHGDHO43175 533 aaKnown RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 RPL21P46778 160 aaKnown RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 CCT3P49368 545 aaKnown RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 KCT2Q8NC54 265 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TNS3Q68CZ2 1445 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 EIF2S3P41091 472 aaKnown RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 PSMD5Q16401 504 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 SNX20Q7Z614 316 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 CRELD1Q96HD1 420 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TMEM237Q96Q45 408 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 SLC38A3Q99624 504 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 NRDE2Q9H7Z3 1164 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 BTRCQ9Y297 605 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 SPATA31A1Q5TZJ5 1347 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TTC34A8MYJ7 566 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 FGBP02675 491 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 FASP25445 335 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 LGALS3BPQ08380 585 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 CCNYL2Q5T2Q4 361 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 NETO2Q8NC67 525 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 SMG7Q92540 1137 aaKnown RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 IL12RB2Q99665 862 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 REEP1Q9H902 201 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 ATAD3AQ9NVI7 634 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 ARMCX1Q9P291 453 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 AXIN1O15169 862 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 SMCO1Q147U7 214 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 PGM5Q15124 567 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 PYDC2Q56P42 97 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 RNF31Q96EP0 1072 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 ZIM3Q96PE6 472 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 APOL4Q9BPW4 351 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 AP4S1Q9Y587 144 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 NEO1Q92859 1461 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 PPP1R37O75864 691 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 IL12RB1P42701 662 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 BCAP31P51572 246 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 DGKEP52429 567 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TRAF3Q13114 568 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 ATAT1Q5SQI0 421 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 SLC16A10Q8TF71 515 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TSEN15Q8WW01 171 aaKnown RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 COPG2Q9UBF2 871 aa13.58□□□□□ -0.24
LMBR1-201ENST00000353442 TIMM8BQ9Y5J9 83 aaPredicted RBP13.58□□□□□ -0.24
LMBR1-201ENST00000353442 DDX3XO00571 662 aaKnown RBP eCLIP13.57□□□□□ -0.246e-12■■■■■ 40.3
LMBR1-201ENST00000353442 STARP49675 285 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.57□□□□□ -0.24
LMBR1-201ENST00000353442 MAGEE2Q8TD90 523 aaPredicted RBP13.57□□□□□ -0.24
LMBR1-201ENST00000353442 SGCDQ92629 289 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 DCUN1D5Q9BTE7 237 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 FNDC11Q9BVV2 318 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 TRIM39Q9HCM9 518 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 ABCC13Q9NSE7 274 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 EHD3Q9NZN3 535 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 WBP11Q9Y2W2 641 aaKnown RBP13.57□□□□□ -0.24
LMBR1-201ENST00000353442 PDE5AO76074 875 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 PCNX4Q63HM2 1172 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 AMIGO1Q86WK6 493 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 CHST4Q8NCG5 386 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 CFAP97Q9P2B7 532 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 GTF3C4Q9UKN8 822 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 DYTNA2CJ06 578 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 ALPPL2P10696 532 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 MSX1P28360 303 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 SNRPFP62306 86 aaKnown RBP13.57□□□□□ -0.24
LMBR1-201ENST00000353442 PPATQ06203 517 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 DLG1Q12959 904 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 RFX4Q33E94 735 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 GCNT7Q6ZNI0 430 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 MTMR9Q96QG7 549 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 CROTQ9UKG9 612 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 WRBO00258 174 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 RPLP2P05387 115 aaKnown RBP13.57□□□□□ -0.24
LMBR1-201ENST00000353442 GNALP38405 381 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMBR1-201ENST00000353442 SPIBQ01892 262 aa13.57□□□□□ -0.24
LMBR1-201ENST00000353442 ZDHHC20Q5W0Z9 365 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms