RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FAM47E-STBD1D6RA91 191 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 UBDO15205 165 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 INPP4BO15327 924 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 DYNC1LI2O43237 492 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 GRID2O43424 1007 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ATP6AP2O75787 350 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ALBP02768 609 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MAGP20916 626 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CASP2P42575 452 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF143P52747 638 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 TAZQ16635 292 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 BOLA3Q53S33 107 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 PAGE2BQ5JRK9 111 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 LIPMQ5VYY2 423 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 PRR23BQ6ZRT6 265 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 PID1Q7Z2X4 250 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 HEATR4Q86WZ0 1026 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 DDIASQ8IXT1 998 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 SEPT8Q92599 483 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 TANKQ92844 425 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 SEPHS2Q99611 448 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 IARS2Q9NSE4 1012 aaKnown RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 VTI1BQ9UEU0 232 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 IPO11Q9UI26 975 aaKnown RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 C9JVG2 144 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 M0R3G1 203 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MAN1A2O60476 641 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 H2AFYO75367 372 aaKnown RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MICAL2O94851 1124 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 HSPA1AP0DMV8 641 aaKnown RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 HSPA1BP0DMV9 641 aaKnown RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 TPSB2P20231 275 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MYF6P23409 242 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ELK4P28324 431 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 GABRB3P28472 473 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 HPCAL1P37235 193 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 STX1BP61266 288 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 NIPAL4Q0D2K0 466 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 EMC2Q15006 297 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 TPSAB1Q15661 275 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 BCL2A1Q16548 175 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CRTC3Q6UUV7 619 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 TAS2R42Q7RTR8 314 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ERMP1Q7Z2K6 904 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 DSG4Q86SJ6 1040 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 AMIGO3Q86WK7 504 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MCF2L2Q86YR7 1114 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CCDC60Q8IWA6 550 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CLIP4Q8N3C7 705 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ABHD11Q8NFV4 315 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 OR52K1Q8NGK4 314 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 OR9I1Q8NGQ6 314 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CALML6Q8TD86 181 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 KCTD4Q8WVF5 259 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ALPK1Q96QP1 1244 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MAGEB5Q9BZ81 275 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MUC3BQ9H195 1237 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 RIC8BQ9NVN3 520 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 OXSMQ9NWU1 459 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 PSME2Q9UL46 239 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CNTN6Q9UQ52 1028 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ERVK-11Q9UQG0 969 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 SLC30A1Q9Y6M5 507 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 SLCO1B7G3V0H7 640 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 DEAF1O75398 565 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MPOP05164 745 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 PSMB4P28070 264 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ALDH4A1P30038 563 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 HOXD11P31277 338 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 IDUAP35475 653 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 PRKAA2P54646 552 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CREB5Q02930 508 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 MAPRE1Q15691 268 aaKnown RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CYP51A1Q16850 503 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 TREML2Q5T2D2 321 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 FAM182BQ5T319 152 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 IQSEC1Q6DN90 963 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 TMC5Q6UXY8 1006 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ADCK1Q86TW2 530 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 SLCO6A1Q86UG4 719 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 HTR3CQ8WXA8 447 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 PIWIL1Q96J94 861 aaKnown RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 RPL10LQ96L21 214 aaKnown RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 TRIM15Q9C019 465 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 PIF1Q9H611 641 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 SPON1Q9HCB6 807 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 BFARQ9NZS9 450 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 KIAA1522Q9P206 1035 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-201ENST00000352993 ARHGAP28Q9P2N2 729 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 UBIAD1Q9Y5Z9 338 aa7.72□□□□□ -1.17
BRCA1-201ENST00000352993 CLRN2A0PK11 232 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 TRPC5OSA6NMA1 111 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 GPR25O00155 361 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 SYNCRIPO60506 623 aaKnown RBP7.71□□□□□ -1.17
BRCA1-201ENST00000352993 DDHD2O94830 711 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 DLGAP3O95886 979 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 PSAPP07602 524 aa7.71□□□□□ -1.17
BRCA1-201ENST00000352993 SNRPB2P08579 225 aaKnown RBP7.71□□□□□ -1.17
BRCA1-201ENST00000352993 ATP6V1B2P21281 511 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms