RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TMCO1Q9UM00 188 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 PEX1O43933 1283 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SLC25A14O95258 325 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-202ENST00000342494 LDLRP01130 860 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 PTPN4P29074 926 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 MRPS5P82675 430 aaKnown RBP15.16■□□□□ 0.02
UBE3B-202ENST00000342494 FRG1Q14331 258 aaKnown RBP15.16■□□□□ 0.02
UBE3B-202ENST00000342494 PTPRNQ16849 979 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 OLFML2BQ68BL8 750 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 KYAT3Q6YP21 454 aaKnown RBP15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SLAIN1Q8ND83 568 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SLC25A23Q9BV35 468 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SLITRK2Q9H156 845 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 DEC1Q9P2X7 70 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 GPN3Q9UHW5 284 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-202ENST00000342494 MAPRE3Q9UPY8 281 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SMIM31A0A1B0GVY4 71 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 MAGEA13PA6NCF6 341 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 PIGNO95427 931 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 NTRK1P04629 796 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 TRIM32Q13049 653 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 NT5DC1Q5TFE4 455 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 CNSTQ6PJW8 725 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 SLC41A1Q8IVJ1 513 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 ZCCHC9Q8N567 271 aaKnown RBP15.15■□□□□ 0.02
UBE3B-202ENST00000342494 KLHL4Q9C0H6 718 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 EPB41L4BQ9H329 900 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 CNGB3Q9NQW8 809 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 KLHL3Q9UH77 587 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 TPP1O14773 563 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 FKBP6O75344 327 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 MYL12AP19105 171 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 PSMB9P28065 219 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 CLCN5P51795 746 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 CRADDP78560 199 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 KLHL35Q6PF15 583 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 CAVIN3Q969G5 261 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 SIKE1Q9BRV8 207 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 FANCEQ9HB96 536 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 ACP6Q9NPH0 428 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 ASF1AQ9Y294 204 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 ZSCAN5DPP0CG00 497 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 ITGB5P18084 799 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 ARF4P18085 180 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-202ENST00000342494 MAXP61244 160 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 PPIGQ13427 754 aaKnown RBP eCLIP15.15■□□□□ 0.026e-6■■■□□ 18.4
UBE3B-202ENST00000342494 ADRM1Q16186 407 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 INTS11Q5TA45 600 aaKnown RBP15.15■□□□□ 0.02
UBE3B-202ENST00000342494 FAAH2Q6GMR7 532 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 TRAF7Q6Q0C0 670 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 SLC24A5Q71RS6 500 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 PTGR2Q8N8N7 351 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-202ENST00000342494 OR5B17Q8NGF7 314 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 DUSP16Q9BY84 665 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 PRDM12Q9H4Q4 367 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 L2HGDHQ9H9P8 463 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.15■□□□□ 0.02
UBE3B-202ENST00000342494 FARP2O94887 1054 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-202ENST00000342494 PIRTP0C851 137 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 LPOP22079 712 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-202ENST00000342494 POLD2P49005 469 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 KPNB1Q14974 876 aaKnown RBP15.15■□□□□ 0.02
UBE3B-202ENST00000342494 ARMCX4Q5H9R4 360 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 ZBTB10Q96DT7 871 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 RNF157Q96PX1 679 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 COL1A2P08123 1366 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 CNTNAP1P78357 1384 aa15.15■□□□□ 0.02
UBE3B-202ENST00000342494 BCLAF3A2AJT9 711 aaKnown RBP15.14■□□□□ 0.01
UBE3B-202ENST00000342494 EPORP19235 508 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 CES1P23141 567 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 OASLQ15646 514 aaKnown RBP15.14■□□□□ 0.01
UBE3B-202ENST00000342494 SNX30Q5VWJ9 437 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 CDC73Q6P1J9 531 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 UNC5AQ6ZN44 842 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 HDDC2Q7Z4H3 204 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 C7orf61Q8IZ16 206 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 APOL4Q9BPW4 351 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 TMPRSS4Q9NRS4 437 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 PDP2Q9P2J9 529 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 GOT1P17174 413 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 LBPP18428 481 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 ZCWPW2Q504Y3 356 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 SNAP47Q5SQN1 464 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 LRRC38Q5VT99 294 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 BHLHB9Q6PI77 547 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 ITFG1Q8TB96 612 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 SLC4A9Q96Q91 983 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 MRPS26Q9BYN8 205 aaKnown RBP15.14■□□□□ 0.01
UBE3B-202ENST00000342494 TBC1D14Q9P2M4 693 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 H0Y858 1186 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 FCHO1O14526 889 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 INAQ16352 499 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 TRMT5Q32P41 509 aaKnown RBP15.14■□□□□ 0.01
UBE3B-202ENST00000342494 CRTC3Q6UUV7 619 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 C12orf29Q8N999 325 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 ANKRD7Q92527 254 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 GULP1Q9UBP9 304 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 COQ6Q9Y2Z9 468 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 PCDHB9Q9Y5E1 797 aa15.14■□□□□ 0.01
UBE3B-202ENST00000342494 YDJCA8MPS7 323 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms