RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 TSEN34Q9BSV6 310 aaKnown RBP11.25□□□□□ -0.61
TRIM29-201ENST00000341846 SPATA16Q9BXB7 569 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 FBXO44Q9H4M3 255 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 GKN1Q9NS71 199 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 SLC39A10Q9ULF5 831 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 MTO1Q9Y2Z2 717 aaKnown RBP11.25□□□□□ -0.61
TRIM29-201ENST00000341846 STARD13Q9Y3M8 1113 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 PHGDHO43175 533 aaKnown RBP11.25□□□□□ -0.61
TRIM29-201ENST00000341846 PRKCGP05129 697 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 MLNP12872 115 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 SKIV2L2P42285 1042 aaKnown RBP11.25□□□□□ -0.61
TRIM29-201ENST00000341846 CNGA3Q16281 694 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 TRIM60Q495X7 471 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 ACSBG2Q5FVE4 666 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 CFAP157Q5JU67 520 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 RAPH1Q70E73 1250 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 KCNMB4Q86W47 210 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 PLD6Q8N2A8 252 aaKnown RBP11.25□□□□□ -0.61
TRIM29-201ENST00000341846 SLC43A3Q8NBI5 491 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 HAPLN3Q96S86 360 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 TTPALQ9BTX7 342 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 HEY2Q9UBP5 337 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 SCML2Q9UQR0 700 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 SQORQ9Y6N5 450 aa11.25□□□□□ -0.61
TRIM29-201ENST00000341846 ZCWPW2A0A1B0GU75 182 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 GJB5O95377 273 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 LYNP07948 512 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TROVE2P10155 538 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 ACVRL1P37023 503 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 BRMS1LQ5PSV4 323 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 FSTL4Q6MZW2 842 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 PPFIBP2Q8ND30 876 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 GATA6Q92908 595 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 E2F7Q96AV8 911 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 EXOC2Q96KP1 924 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 MIPEPQ99797 713 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 NOL6Q9H6R4 1146 aaKnown RBP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TMEM216Q9P0N5 145 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 FNDC3AQ9Y2H6 1198 aaKnown RBP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TSPAN3O60637 253 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 MYL2P10916 166 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 ATF6P18850 670 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 SERPINB3P29508 390 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 OR1E1P30953 314 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 CD86P42081 329 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 CDK7P50613 346 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 DSC2Q02487 901 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 NIPAL4Q0D2K0 466 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 KCTD11Q693B1 232 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 LDB1Q86U70 411 aaPredicted RBP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 NPAS4Q8IUM7 802 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 RTL3Q8N8U3 475 aaKnown RBP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 C10orf82Q8WW14 230 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 PPP1R36Q96LQ0 422 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TRIM55Q9BYV6 548 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 SHCBP1LQ9BZQ2 653 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 SP110Q9HB58 689 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 GLOD4Q9HC38 313 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 PRDM5Q9NQX1 630 aaPredicted RBP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 ZNF180Q9UJW8 692 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TRHDEQ9UKU6 1024 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 ZNF510Q9Y2H8 683 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 A0A0D9SEW6 157 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 SYN3O14994 580 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 SUPT3HO75486 399 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 CPA2P48052 419 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 RASSF2P50749 326 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 CDH17Q12864 832 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TMED1Q13445 227 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TAF12Q16514 161 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 FASTKD1Q53R41 847 aaKnown RBP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 ALYREFQ86V81 257 aaKnown RBP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TMEM120AQ9BXJ8 343 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 CASS4Q9NQ75 786 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 EIF2B3Q9NR50 452 aaKnown RBP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM29-201ENST00000341846 CLIC5Q9NZA1 410 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TLR6Q9Y2C9 796 aa11.24□□□□□ -0.61
TRIM29-201ENST00000341846 TSC2P49815 1807 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 ITM2AO43736 263 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 ARFIP2P53365 341 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 MPP1Q00013 466 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 EIF4EBP2Q13542 120 aaPredicted RBP11.23□□□□□ -0.61
TRIM29-201ENST00000341846 PTPRCAPQ14761 206 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 LRRC36Q1X8D7 754 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM29-201ENST00000341846 WASHC2DQ5SRD0 308 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 NAPEPLDQ6IQ20 393 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 WDR60Q8WVS4 1066 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 FUBP3Q96I24 572 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM29-201ENST00000341846 TBL1YQ9BQ87 522 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 CYP4F11Q9HBI6 524 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 TLR8Q9NR97 1041 aaKnown RBP11.23□□□□□ -0.61
TRIM29-201ENST00000341846 SNX15Q9NRS6 342 aa11.23□□□□□ -0.61
TRIM29-201ENST00000341846 EYSQ5T1H1 3165 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms