RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CYP3A7P24462 503 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 MNDAP41218 407 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ATP5OP48047 213 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SOX9P48436 509 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 BCAR1P56945 870 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 MRPS22P82650 360 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 MVKQ03426 396 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 TRIP13Q15645 432 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 LONRF1Q17RB8 773 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 EFHC1Q5JVL4 640 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 NAA35Q5VZE5 725 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 TTC33Q6PID6 262 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 CXCL17Q6UXB2 119 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 NUP93Q8N1F7 819 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ACTRT2Q8TDY3 377 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 DEPDC1BQ8WUY9 529 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 METTL21AQ8WXB1 218 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM125Q96AQ2 219 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 S100A13Q99584 98 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 RAD9AQ99638 391 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SLC25A23Q9BV35 468 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 APOL5Q9BWW9 433 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 UNC45AQ9H3U1 944 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 IL1RAPQ9NPH3 570 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ALKBH4Q9NXW9 302 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 CHORDC1Q9UHD1 332 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHA4Q9UN74 947 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 EIF3LQ9Y262 564 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 KIAA1671Q9BY89 1806 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 BBIP1A8MTZ0 92 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 HAX1O00165 279 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 NFIBO00712 420 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM127O75204 238 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 TGDSO95455 350 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 BCL10O95999 233 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ASS1P00966 412 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 FSHRP23945 695 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 OXTRP30559 389 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 CAP2P40123 477 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PDIA2Q13087 525 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 CAMK1Q14012 370 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF284Q2VY69 593 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 HLA-DQA1Q5Y7H0 255 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SWSAP1Q6NVH7 229 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 KDM7AQ6ZMT4 941 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 GPR135Q8IZ08 494 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 UROC1Q96N76 676 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 NT5C1AQ9BXI3 368 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 GOLPH3Q9H4A6 298 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 GALNT8Q9NY28 637 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 GCNT4Q9P109 453 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 STUB1Q9UNE7 303 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 RNF24Q9Y225 148 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 EP300Q09472 2414 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PLXNA1Q9UIW2 1896 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SH3D21A4FU49 640 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 LRRC14BA6NHZ5 514 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 H3BRB1 525 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SCAMP1O15126 338 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 TMCC2O75069 709 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ZSCAN5DPP0CG00 497 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 CYP11B2P19099 503 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 CHN2P52757 468 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 TWF1Q12792 350 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 STX4Q12846 297 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF177Q13360 481 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 KIF19Q2TAC6 998 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ATP13A5Q4VNC0 1218 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 C10orf120Q5SQS8 335 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PDZK1Q5T2W1 519 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ASB18Q6ZVZ8 466 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ADCK2Q7Z695 626 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PTAR1Q7Z6K3 402 aaPredicted RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 RASGRP3Q8IV61 690 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PPM1KQ8N3J5 372 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ATXN2LQ8WWM7 1075 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 MAP4K1Q92918 833 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ZDHHC15Q96MV8 337 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 CCT8L2Q96SF2 557 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ACTR6Q9GZN1 396 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SEMA4AQ9H3S1 761 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 TUT1Q9H6E5 874 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SLAMF7Q9NQ25 335 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 GPATCH2Q9NW75 528 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SNX7Q9UNH6 387 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 RHPN2P1A8MT19 583 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 B4E1Z4 1266 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SULT1B1O43704 296 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 NR2F6P10588 404 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 MAPK10P53779 464 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PMS1P54277 932 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PSPHP78330 225 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PAGE2BQ5JRK9 111 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 ARHGAP17Q68EM7 881 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SERPINA13PQ6UXR4 307 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 PIWIL4Q7Z3Z4 852 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 R3HCC1LQ7Z5L2 792 aaKnown RBP3.32□□□□□ -1.88
CSMD3-202ENST00000339701 FGD2Q7Z6J4 655 aa3.32□□□□□ -1.88
CSMD3-202ENST00000339701 SAPCD2Q86UD0 394 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms