RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ITIH4Q14624 930 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 OR5T3Q8NGG3 340 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 SLC38A2Q96QD8 506 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 COPG2Q9UBF2 871 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 DDX3XO00571 662 aaKnown RBP eCLIP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 SNRPD1P62314 119 aaKnown RBP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 GIT2Q14161 759 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 FNBP1LQ5T0N5 605 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 PHF10Q8WUB8 498 aaKnown RBP11.89□□□□□ -0.51
SHANK2-201ENST00000338508 SMPDL3BQ92485 455 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 ASAH2Q9NR71 780 aa11.89□□□□□ -0.51
SHANK2-201ENST00000338508 ZNF879B4DU55 563 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 H7C0S8 307 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 HOXC12P31275 282 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 ATP5C1P36542 298 aaKnown RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 PIK3CGP48736 1102 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 FAM187BQ17R55 369 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 PERM1Q5SV97 790 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 RBM43Q6ZSC3 357 aaKnown RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 SETD9Q8NE22 299 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 OR4A15Q8NGL6 344 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 KAT2AQ92830 837 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 MLPHQ9BV36 600 aaPredicted RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 POLR1EQ9GZS1 481 aaKnown RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 DCLRE1BQ9H816 532 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 CHMP1AQ9HD42 196 aaPredicted RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 NR2E3Q9Y5X4 410 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 NCAM2O15394 837 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 RLN1P04808 185 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 VIL1P09327 827 aaKnown RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 CCNA2P20248 432 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 MYL9P24844 172 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 EIF2S3P41091 472 aaKnown RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 STAT5AP42229 794 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 MASP1P48740 699 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 MYBPC2Q14324 1141 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 ADRM1Q16186 407 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 DHRSXQ8N5I4 330 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 NETO2Q8NC67 525 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 ZBTB45Q96K62 511 aaPredicted RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 GNPTGQ9UJJ9 305 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 NT5C1B-RDH14C9J2C7 533 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 TLL1O43897 1013 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 PROCP04070 461 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 CCDC166P0CW27 439 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 PGAM1P18669 254 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 HTR1BP28222 390 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 VANGL1Q8TAA9 524 aaPredicted RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 MAML3Q96JK9 1138 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 TRMT13Q9NUP7 481 aaKnown RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 ACADLP28330 430 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 INO80DQ53TQ3 878 aaPredicted RBP11.88□□□□□ -0.51
SHANK2-201ENST00000338508 XRRA1Q6P2D8 792 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 FAM129CQ86XR2 697 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 LPPQ93052 612 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 BRINP2Q9C0B6 783 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 LMAN2LQ9H0V9 348 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 GIT1Q9Y2X7 761 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 STARD13Q9Y3M8 1113 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 PCDHA3Q9Y5H8 950 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 PSMB4P28070 264 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 PSEN2P49810 448 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 NFIAQ12857 509 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 FAM91A1Q658Y4 838 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 FBXO25Q8TCJ0 367 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 C5orf34Q96MH7 638 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 GAL3ST1Q99999 423 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 C1QTNF1Q9BXJ1 281 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 MYRFQ9Y2G1 1151 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 AVILO75366 819 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 GRIA3P42263 894 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 RXRGP48443 463 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 AKR1D1P51857 326 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 MAXP61244 160 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 ARHGAP36Q6ZRI8 547 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 QRFPRQ96P65 431 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 FNDC11Q9BVV2 318 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 FAIM2Q9BWQ8 316 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 MARCH7Q9H992 704 aa11.88□□□□□ -0.51
SHANK2-201ENST00000338508 TUFMP49411 452 aaKnown RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 SEC13P55735 322 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 SF1Q15637 639 aaKnown RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 KCNT2Q6UVM3 1135 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ADCY4Q8NFM4 1077 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 OR10H5Q8NGA6 315 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 KLHL32Q96NJ5 620 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 CLIC5Q9NZA1 410 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ENOPH1Q9UHY7 261 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ZNF214Q9UL59 606 aaPredicted RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 CAPN6Q9Y6Q1 641 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 CRB1P82279 1406 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 CHD1O14646 1710 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 RGS20O76081 388 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ERVK-24P63145 666 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 PCDH1Q08174 1060 aa11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ZC3H12AQ5D1E8 599 aaKnown RBP11.87□□□□□ -0.51
SHANK2-201ENST00000338508 ATCAYQ86WG3 371 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms