RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 EXT2Q93063 718 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 UTP4Q969X6 686 aaKnown RBP12.75□□□□□ -0.37
LIMK1-201ENST00000336180 RBBP8Q99708 897 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 SMG9Q9H0W8 520 aaKnown RBP12.75□□□□□ -0.37
LIMK1-201ENST00000336180 TASP1Q9H6P5 420 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 CYP4F12Q9HCS2 524 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 TMEM39AQ9NV64 488 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 CRYL1Q9Y2S2 319 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 NEMP1O14524 444 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 ZMPSTE24O75844 475 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 DLDP09622 509 aaKnown RBP12.75□□□□□ -0.37
LIMK1-201ENST00000336180 NAT1P18440 290 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 SLC1A2P43004 574 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 COG7P83436 770 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 PCLAFQ15004 111 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 GIMAP7Q8NHV1 300 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 CLSTN3Q9BQT9 956 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 ARL5AQ9Y689 179 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-201ENST00000336180 CBX4O00257 560 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 GPR39O43194 453 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 COCHO43405 550 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 BNIP3LO60238 219 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 TSPAN8P19075 237 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 CRHR1P34998 444 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 CCNHP51946 323 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-201ENST00000336180 CLNKQ7Z7G1 428 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 PARP9Q8IXQ6 854 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 NSMCE3Q96MG7 304 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 IL12RB2Q99665 862 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 TLR9Q9NR96 1032 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 REV3LO60673 3130 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 NYNRINQ9P2P1 1898 aaKnown RBP12.74□□□□□ -0.37
LIMK1-201ENST00000336180 EIF4E1BA6NMX2 242 aaKnown RBP12.74□□□□□ -0.37
LIMK1-201ENST00000336180 NRG2O14511 850 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-201ENST00000336180 FCHO1O14526 889 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 PRRG1O14668 218 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 PEX11BO96011 259 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 CHRNGP07510 517 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 FGF3P11487 239 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-201ENST00000336180 TACR2P21452 398 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 CCNFP41002 786 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 SERPINB9P50453 376 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 SCNN1BP51168 640 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 TBC1D25Q3MII6 688 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 RYBPQ8N488 228 aaPredicted RBP12.74□□□□□ -0.37
LIMK1-201ENST00000336180 ATP6V0D2Q8N8Y2 350 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
LIMK1-201ENST00000336180 IL22Q9GZX6 179 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 SOX13Q9UN79 622 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 SQORQ9Y6N5 450 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 PTPRDP23468 1912 aa12.74□□□□□ -0.37
LIMK1-201ENST00000336180 DOCK6Q96HP0 2047 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 A8MX80 341 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 USP1O94782 785 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 TXNDC8Q6A555 127 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 SPRED2Q7Z698 418 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 ZNF683Q8IZ20 524 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 SSU72Q9NP77 194 aaKnown RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 OR6C75A6NL08 312 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 TMEM189-UBE2V1I3L0A0 370 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 FGF10O15520 208 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 SNAP91O60641 907 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 DIAPH2O60879 1101 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 SLC1A6P48664 564 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 THOC5Q13769 683 aaKnown RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 TRIP4Q15650 581 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 PIM3Q86V86 326 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 LONP2Q86WA8 852 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 TREML1Q86YW5 311 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 OR13C4Q8NGS5 318 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 GRAMD1AQ96CP6 724 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 BTN2A3PQ96KV6 586 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 MARK4Q96L34 752 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 CPNE1Q99829 537 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 OSBPL1AQ9BXW6 950 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 MARCH4Q9P2E8 410 aaPredicted RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 PACSIN3Q9UKS6 424 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 RUVBL2Q9Y230 463 aaKnown RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 UNC5CO95185 931 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 MT-CO1P00395 513 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 PROCP04070 461 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 CORO1AP31146 461 aaKnown RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 LIMK2P53671 638 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 CYP4F8P98187 520 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 TWF1Q12792 350 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 CRLF3Q8IUI8 442 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 CCNYL1Q8N7R7 359 aa12.73□□□□□ -0.37
LIMK1-201ENST00000336180 PPHLN1Q8NEY8 458 aaKnown RBP12.73□□□□□ -0.37
LIMK1-201ENST00000336180 MYLIPQ8WY64 445 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms