RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 REP15Q6BDI9 236 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ZNF280DQ6N043 979 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 KCNMB4Q86W47 210 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 TTC30AQ86WT1 665 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 SLC41A1Q8IVJ1 513 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 ZBTB8OSQ8IWT0 167 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 SLC15A4Q8N697 577 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 RSPH1Q8WYR4 309 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 CPB2Q96IY4 423 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 NEURL2Q9BR09 285 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 PRDM12Q9H4Q4 367 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 CACNA2D2Q9NY47 1150 aa9.78□□□□□ -0.84
PTPRA-202ENST00000318266 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-202ENST00000318266 HTR3EA5X5Y0 456 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 DLX3O60479 287 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 MAP4P27816 1152 aaKnown RBP9.77□□□□□ -0.84
PTPRA-202ENST00000318266 ARL4AP40617 200 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 POU5F1BQ06416 359 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 NSUN2Q08J23 767 aaKnown RBP eCLIP9.77□□□□□ -0.84
PTPRA-202ENST00000318266 TBCELQ5QJ74 424 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 GALNT18Q6P9A2 607 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 MAMDC4Q6UXC1 1216 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 DHFR2Q86XF0 187 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 SPPL2CQ8IUH8 684 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 SNX29P2Q8IUI4 249 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 SLC15A3Q8IY34 581 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 HM13Q8TCT9 377 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 TFAP2CQ92754 450 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 KHSRPQ92945 711 aaKnown RBP eCLIP9.77□□□□□ -0.841e-7■■■■□ 24.1
PTPRA-202ENST00000318266 PBXIP1Q96AQ6 731 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 FAM149B1Q96BN6 582 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 LRCH3Q96II8 777 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 SLC45A3Q96JT2 553 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 EFHD1Q9BUP0 239 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 ADI1Q9BV57 179 aa9.77□□□□□ -0.84
PTPRA-202ENST00000318266 NPLQ9BXD5 320 aaPredicted RBP9.77□□□□□ -0.84
PTPRA-202ENST00000318266 CNOT11Q9UKZ1 510 aaKnown RBP9.77□□□□□ -0.84
PTPRA-202ENST00000318266 RBM47A0AV96 593 aaKnown RBP9.77□□□□□ -0.85
PTPRA-202ENST00000318266 MRASO14807 208 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 MDM4O15151 490 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 SPTLC1O15269 473 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 MAFGO15525 162 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 GABBR2O75899 941 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 NCAM1P13591 858 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 ATP6V1B2P21281 511 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 STAT5BP51692 787 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 TUBA4AP68366 448 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 SLC6A3Q01959 620 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 PERM1Q5SV97 790 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 MPZL3Q6UWV2 235 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 ZYG11AQ6WRX3 759 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 KCTD8Q6ZWB6 473 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 CYS1Q717R9 158 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 IFNEQ86WN2 208 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 NT5DC4Q86YG4 428 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 CNTD1Q8N815 330 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 PNPLA1Q8N8W4 532 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 HEPHQ9BQS7 1158 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 UNC93B1Q9H1C4 597 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 ZNF385DQ9H6B1 395 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 MINDY3Q9H8M7 445 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 SPAG4Q9NPE6 437 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 MRPL42Q9Y6G3 142 aaKnown RBP9.77□□□□□ -0.85
PTPRA-202ENST00000318266 SDHDO14521 159 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 GPC4O75487 556 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 C8BP07358 591 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 GSTT2P0CG29 244 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 GSTT2BP0CG30 244 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 MLNP12872 115 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 ADORA2BP29275 332 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 LRPAP1P30533 357 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 SLC7A1P30825 629 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 PITX1P78337 314 aaPredicted RBP9.77□□□□□ -0.85
PTPRA-202ENST00000318266 SOWAHAQ2M3V2 549 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 CCDC92Q53HC0 331 aaPredicted RBP9.77□□□□□ -0.85
PTPRA-202ENST00000318266 C4orf22Q6V702 233 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 CLEC14AQ86T13 490 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 SIX6OS1Q8N1H7 587 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 CPSF7Q8N684 471 aaKnown RBP9.77□□□□□ -0.85
PTPRA-202ENST00000318266 BPIFB6Q8NFQ5 453 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 HMGCLL1Q8TB92 370 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 TANKQ92844 425 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 NXNL1Q96CM4 212 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 TBCBQ99426 244 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 PCYT2Q99447 389 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 UPF3AQ9H1J1 476 aaKnown RBP9.77□□□□□ -0.85
PTPRA-202ENST00000318266 CDT1Q9H211 546 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 LRRC40Q9H9A6 602 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 FBRSL1Q9HCM7 1045 aaKnown RBP9.77□□□□□ -0.85
PTPRA-202ENST00000318266 TNFRSF12AQ9NP84 129 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 BFARQ9NZS9 450 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 SUCOQ9UBS9 1254 aaKnown RBP9.77□□□□□ -0.85
PTPRA-202ENST00000318266 OAZ3Q9UMX2 235 aa9.77□□□□□ -0.85
PTPRA-202ENST00000318266 TRIP11Q15643 1979 aa9.76□□□□□ -0.85
PTPRA-202ENST00000318266 ZCWPW2A0A1B0GU75 182 aa9.76□□□□□ -0.85
PTPRA-202ENST00000318266 SPATA31C2B4DYI2 1134 aa9.76□□□□□ -0.85
PTPRA-202ENST00000318266 CLOCKO15516 846 aa9.76□□□□□ -0.85
PTPRA-202ENST00000318266 CAPNS1P04632 268 aa9.76□□□□□ -0.85
PTPRA-202ENST00000318266 MPOP05164 745 aa9.76□□□□□ -0.85
PTPRA-202ENST00000318266 YWHAQP27348 245 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms