RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 DUSP16Q9BY84 665 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 EURLQ9NYK6 297 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 SLC24A2Q9UI40 661 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 PCDHGB4Q9UN71 923 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 PCDHGB5Q9Y5G0 923 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 PQBP1O60828 265 aaKnown RBP13.02□□□□□ -0.33
VAT1L-201ENST00000302536 KLHL2O95198 593 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 IL4RP24394 825 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 HALP42357 657 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 GPR15P49685 360 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 MRPS5P82675 430 aaKnown RBP13.02□□□□□ -0.33
VAT1L-201ENST00000302536 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
VAT1L-201ENST00000302536 SLC39A12Q504Y0 691 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 UNC93AQ86WB7 457 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 NT5DC4Q86YG4 428 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 NIPA2Q8N8Q9 360 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 PTCD3Q96EY7 689 aaKnown RBP13.02□□□□□ -0.33
VAT1L-201ENST00000302536 PRDM12Q9H4Q4 367 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
VAT1L-201ENST00000302536 TMEM247A6NEH6 219 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 ZBTB11O95625 1053 aaPredicted RBP13.01□□□□□ -0.33
VAT1L-201ENST00000302536 L1CAMP32004 1257 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 GRK4P32298 578 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 GARSP41250 739 aaKnown RBP13.01□□□□□ -0.33
VAT1L-201ENST00000302536 ZIK1Q3SY52 487 aaPredicted RBP13.01□□□□□ -0.33
VAT1L-201ENST00000302536 ANKDD1AQ495B1 522 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 FNIP1Q8TF40 1166 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 RNF139Q8WU17 664 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 BHMTQ93088 406 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 SMOQ99835 787 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 TMLHEQ9NVH6 421 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 CCDC167Q9P0B6 97 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 ATP6AP2A0A1C7CYW4 349 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 MAN1A2O60476 641 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 ATP6AP2O75787 350 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 RALBP11234 206 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 AXLP30530 894 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 TRMT10BQ6PF06 316 aaKnown RBP13.01□□□□□ -0.33
VAT1L-201ENST00000302536 XKR5Q6UX68 686 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 CCDC81Q6ZN84 652 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 TFAP2DQ7Z6R9 452 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 ATAD1Q8NBU5 361 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 TMIGD2Q96BF3 282 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 ZNF669Q96BR6 464 aaPredicted RBP13.01□□□□□ -0.33
VAT1L-201ENST00000302536 DCUN1D1Q96GG9 259 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 TKTL2Q9H0I9 626 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 RPL26L1Q9UNX3 145 aaKnown RBP13.01□□□□□ -0.33
VAT1L-201ENST00000302536 HAS3O00219 553 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 RPL10P27635 214 aaKnown RBP13.01□□□□□ -0.33
VAT1L-201ENST00000302536 RALGDSQ12967 914 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 TLR1Q15399 786 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 PDSS2Q86YH6 399 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 SPNS2Q8IVW8 549 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 TSPAN14Q8NG11 270 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 GAB3Q8WWW8 586 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 CAPNS2Q96L46 248 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 WDCPQ9H6R7 721 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 VRTNQ9H8Y1 702 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 KANSL3Q9P2N6 904 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 DRG1Q9Y295 367 aaKnown RBP13.01□□□□□ -0.33
VAT1L-201ENST00000302536 CLUHO75153 1309 aa13.01□□□□□ -0.33
VAT1L-201ENST00000302536 WDR27A2RRH5 827 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 TM9SF1O15321 606 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 CYBAP13498 195 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 PSMB4P28070 264 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 FDFT1P37268 417 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 MATKP42679 507 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 BFSP2Q13515 415 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 CMPK2Q5EBM0 449 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
VAT1L-201ENST00000302536 OGFOD2Q6N063 350 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 BNC2Q6ZN30 1099 aaPredicted RBP13□□□□□ -0.33
VAT1L-201ENST00000302536 PAQR9Q6ZVX9 377 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 SPATA2LQ8IUW3 424 aaPredicted RBP13□□□□□ -0.33
VAT1L-201ENST00000302536 TTC39CQ8N584 583 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 COLGALT1Q8NBJ5 622 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 SEPT5Q99719 369 aaPredicted RBP13□□□□□ -0.33
VAT1L-201ENST00000302536 DGCR6LQ9BY27 220 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 STARD7Q9NQZ5 370 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 DNAJB4Q9UDY4 337 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 NUP205Q92621 2012 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 TMEM88BA6NKF7 163 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 C9IYK1 514 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 RNF103O00237 685 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 TADA2AO75478 443 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 ERVK-10P10266 1014 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 GABRB2P47870 512 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 GJA9P57773 515 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 ADAM17P78536 824 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 CTC1Q2NKJ3 1217 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 MTX3Q5HYI7 312 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 GLB1LQ6UWU2 654 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 RNF19BQ6ZMZ0 732 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 CYP4V2Q6ZWL3 525 aaPredicted RBP13□□□□□ -0.33
VAT1L-201ENST00000302536 CHST15Q7LFX5 561 aaPredicted RBP13□□□□□ -0.33
VAT1L-201ENST00000302536 RNF180Q86T96 592 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 SEPHS2Q99611 448 aa13□□□□□ -0.33
VAT1L-201ENST00000302536 NOL6Q9H6R4 1146 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms