RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NDNQ99608 321 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 KIFC1Q9BW19 673 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 SHCBP1LQ9BZQ2 653 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 ENTPD7Q9NQZ7 604 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 SIRPGQ9P1W8 387 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 OR51F1A6NGY5 319 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 MUSKO15146 869 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 GSTA1P08263 222 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 ALDH1A3P47895 512 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 SERPINB8P50452 374 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 HECTD3Q5T447 861 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 CCDC91Q7Z6B0 441 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 CRLF3Q8IUI8 442 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 BLOC1S5Q8TDH9 187 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 FAM136AQ96C01 138 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 DCDC2Q9UHG0 476 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 TCAF1Q9Y4C2 921 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 MYLKQ15746 1914 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 ZNF840PA6NDX5 716 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 KLKB1P03952 638 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 CORO1AP31146 461 aaKnown RBP18.16■□□□□ 0.5
CAPN1-201ENST00000279247 HTR7P34969 479 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 CPA2P48052 419 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 TUFMP49411 452 aaKnown RBP18.16■□□□□ 0.5
CAPN1-201ENST00000279247 NDST2P52849 883 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 ZNF33AQ06730 810 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 SLC8B1Q6J4K2 584 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 SGF29Q96ES7 293 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 PPP1R36Q96LQ0 422 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 OXCT2Q9BYC2 517 aaPredicted RBP18.16■□□□□ 0.5
CAPN1-201ENST00000279247 SLC25A51Q9H1U9 297 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 TASP1Q9H6P5 420 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 PSMD3O43242 534 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 RASSF9O75901 435 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 GSRP00390 522 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 CXCL10P02778 98 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 ARNTP27540 789 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 SLC1A2P43004 574 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 GJA8P48165 433 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 TWF1Q12792 350 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 PCLAFQ15004 111 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 PDPK2PQ6A1A2 396 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 RANBP10Q6VN20 620 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 EBF4Q9BQW3 602 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 SUDS3Q9H7L9 328 aaPredicted RBP18.16■□□□□ 0.5
CAPN1-201ENST00000279247 PPARGC1AQ9UBK2 798 aaKnown RBP18.16■□□□□ 0.5
CAPN1-201ENST00000279247 TLK1Q9UKI8 766 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 DNAJC16Q9Y2G8 782 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 MIA3Q5JRA6 1907 aa18.16■□□□□ 0.5
CAPN1-201ENST00000279247 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 TK2O00142 265 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 CBX4O00257 560 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 UNC5CO95185 931 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 NQO1P15559 274 aaKnown RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 EN2P19622 333 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ADRA1AP35348 466 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ELF3P78545 371 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ZNF789Q5FWF6 425 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 KYAT3Q6YP21 454 aaKnown RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 CLNKQ7Z7G1 428 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ZC3HC1Q86WB0 502 aaKnown RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 SMIM14Q96QK8 99 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 TRPM5Q9NZQ8 1165 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 CACNG3O60359 315 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ACSL4O60488 711 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ELF1P32519 619 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 RCN2Q14257 317 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 LBRQ14739 615 aaKnown RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ZNF461Q8TAF7 563 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 KCTD4Q8WVF5 259 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ELMO2Q96JJ3 720 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 SLC22A12Q96S37 553 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 TBX21Q9UL17 535 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 YIPF1Q9Y548 306 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 DOCK6Q96HP0 2047 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ZNF189O75820 626 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 HAUS5O94927 633 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 PROCP04070 461 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 CPA3P15088 417 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 SLC11A2P49281 568 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ALDH18A1P54886 795 aaKnown RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 OCRLQ01968 901 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 NAB1Q13506 487 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 SERINC3Q13530 473 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 KDELC1Q6UW63 502 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 LINGO4Q6UY18 593 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ATG14Q6ZNE5 492 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 TRIM42Q8IWZ5 723 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 IMP4Q96G21 291 aaKnown RBP18.15■□□□□ 0.5
CAPN1-201ENST00000279247 NMUR2Q9GZQ4 415 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 COPG2Q9UBF2 871 aa18.15■□□□□ 0.5
CAPN1-201ENST00000279247 ZBBXA8MT70 800 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 CLTBP09497 229 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 FGF3P11487 239 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-201ENST00000279247 HMGA1P17096 107 aaKnown RBP18.14■□□□□ 0.49
CAPN1-201ENST00000279247 SLC1A6P48664 564 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 SERPINH1P50454 418 aaKnown RBP18.14■□□□□ 0.49
CAPN1-201ENST00000279247 SCNN1BP51168 640 aa18.14■□□□□ 0.49
CAPN1-201ENST00000279247 NRG1Q02297 640 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-201ENST00000279247 ACMSDQ8TDX5 336 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms