RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TSNARE1Q96NA8 513 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 BTBD9Q96Q07 612 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 GPR22Q99680 433 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 SH3GL3Q99963 347 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 C17orf80Q9BSJ5 609 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 DRC3Q9H069 523 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 TCF7L2Q9NQB0 619 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 MRGBPQ9NV56 204 aa13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PIH1D1Q9NWS0 290 aaKnown RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PIN4Q9Y237 131 aaKnown RBP13.11□□□□□ -0.31
C9orf3-201ENST00000277198 PRRC2BQ5JSZ5 2229 aaKnown RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 RGSL1A5PLK6 1076 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 HDAC3O15379 428 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 ZBTB24O43167 697 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 DCXO43602 365 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 FYNP06241 537 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 IGFBP4P22692 258 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 CRYBB1P53674 252 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 DAOAP59103 153 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 TBL3Q12788 808 aaKnown RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 CDH17Q12864 832 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 PRKAA1Q13131 559 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 UGP2Q16851 508 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 HSP90AA5PQ58FG0 334 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 RAB41Q5JT25 222 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 UBXN11Q5T124 520 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 LIPMQ5VYY2 423 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 ARMC3Q5W041 872 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 CES3Q6UWW8 571 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 C16orf89Q6UX73 402 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 ZYG11AQ6WRX3 759 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 FRMD7Q6ZUT3 714 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 SDCCAG8Q86SQ7 713 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 MFN1Q8IWA4 741 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 CCDC117Q8IWD4 279 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 PLD6Q8N2A8 252 aaKnown RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 TMEM86AQ8N2M4 240 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 CPSF7Q8N684 471 aaKnown RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 ZNF781Q8N8C0 355 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 TDRD5Q8NAT2 981 aaKnown RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 RP9Q8TA86 221 aaKnown RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 VPS39Q96JC1 886 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 TEKT5Q96M29 485 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 GBP5Q96PP8 586 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 PPP1R2P1Q96PQ5 205 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 YME1L1Q96TA2 773 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 EPAS1Q99814 870 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 KIFC1Q9BW19 673 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 PRDM6Q9NQX0 595 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 C6orf203Q9P0P8 240 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-201ENST00000277198 STK39Q9UEW8 545 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 TLK1Q9UKI8 766 aa13.1□□□□□ -0.31
C9orf3-201ENST00000277198 CACNG3O60359 315 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 BEST1O76090 585 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 UQCRBP14927 111 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 CD68P34810 354 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 LHX1P48742 406 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 RPL14P50914 215 aaKnown RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 EPHB1P54762 984 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 COG7P83436 770 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 SOX4Q06945 474 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 MED21Q13503 144 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 HERC3Q15034 1050 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 VWA5B1Q5TIE3 1220 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 RNF220Q5VTB9 566 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 SLC25A41Q8N5S1 370 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 NDRG1Q92597 394 aaKnown RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 AGAP3Q96P47 875 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 AGAP2Q99490 1192 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 RHOJQ9H4E5 214 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 C20orf96Q9NUD7 363 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 ZNF358Q9NW07 568 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 TTC3P53804 2025 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 ENO4A6NNW6 628 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 NDUFV1P49821 464 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 SH3BGRP55822 239 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 CUL3Q13618 768 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 SEL1L3Q68CR1 1132 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 NAPRTQ6XQN6 538 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 RAPH1Q70E73 1250 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 ST13P4Q8IZP2 240 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 PHTF2Q8N3S3 785 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 PDCD6IPQ8WUM4 868 aaKnown RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 PYDC1Q8WXC3 89 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 MFSD3Q96ES6 412 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 TSGA13Q96PP4 275 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 ADAM2Q99965 735 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 MLPHQ9BV36 600 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 COLEC11Q9BWP8 271 aa13.09□□□□□ -0.31
C9orf3-201ENST00000277198 GATA5Q9BWX5 397 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 ACE2Q9BYF1 805 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 RC3H2Q9HBD1 1191 aaKnown RBP13.09□□□□□ -0.31
C9orf3-201ENST00000277198 TMPRSS4Q9NRS4 437 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms