RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ARHGAP9Q9BRR9 750 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 TCEAL2Q9H3H9 227 aaPredicted RBP14.08□□□□□ -0.16
DDX39A-201ENST00000242776 PLCB1Q9NQ66 1216 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 IL36AQ9UHA7 158 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 IL17BQ9UHF5 180 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 OR51B4Q9Y5P0 310 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 HS3ST4Q9Y661 456 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 SPTA1P02549 2419 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 FAM170AA1A519 330 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 H3BM21 787 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 THAP12O43422 761 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 ADCY5O95622 1261 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 CCR1P32246 355 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 CSRP3P50461 194 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 TGIF1Q15583 401 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 NEK5Q6P3R8 708 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 ARL14Q8N4G2 192 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 EXTL1Q92935 676 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 PPP1R13BQ96KQ4 1090 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 CCDC114Q96M63 670 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 KREMEN1Q96MU8 473 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 PPP1R9BQ96SB3 815 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 IL12RB2Q99665 862 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 TRIM62Q9BVG3 475 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 SLC4A5Q9BY07 1137 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 SLC17A9Q9BYT1 436 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 USP29Q9HBJ7 922 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 APEX2Q9UBZ4 518 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 VPS51Q9UID3 782 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 SIK3Q9Y2K2 1263 aa14.07□□□□□ -0.16
DDX39A-201ENST00000242776 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.07□□□□□ -0.167e-8■■□□□ 13.5
DDX39A-201ENST00000242776 CDRT15L2A8MXV6 281 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 GOLGA6L6A8MZA4 724 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SPINT1O43278 529 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 EFSO43281 561 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 PAGE1O75459 146 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 LEFTY1O75610 366 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 CSF2P04141 144 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 PRNPP04156 253 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 TPM1P09493 284 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 NME1P15531 152 aaKnown RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SLC9A1P19634 815 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 CDC25BP30305 580 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 PBX1P40424 430 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 ADKP55263 362 aaKnown RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 KRT83P78385 493 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SKOR1P84550 965 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 TRIM14Q14142 442 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 ALFQ53S48 1182 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SPECC1LQ69YQ0 1117 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 USP53Q70EK8 1073 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 TFAP2DQ7Z6R9 452 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 PARGQ86W56 976 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 PASD1Q8IV76 773 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 WDR36Q8NI36 951 aaKnown RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 LMO3Q8TAP4 145 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 CCNL2Q96S94 520 aaPredicted RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 EPB41L5Q9HCM4 733 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 FAM207AQ9NSI2 230 aaPredicted RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 BOD1L1Q8NFC6 3051 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 COL12A1Q99715 3063 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 A0A0D9SEW6 157 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SPTY2D1-AS1A0A0U1RR47 76 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 EME2A4GXA9 379 aaPredicted RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SLC2A3P11169 496 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 HGFP14210 728 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 RECQLP46063 649 aaPredicted RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 RPL34P49207 117 aaKnown RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 GCNT1Q02742 428 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 CCDC15Q0P6D6 951 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SPIDRQ14159 915 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 ARL13BQ3SXY8 428 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 LINC00303Q3SY05 128 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 TMEM259Q4ZIN3 620 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 C22orf39Q6P5X5 142 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
DDX39A-201ENST00000242776 DPY19L3Q6ZPD9 716 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 BEND5Q7L4P6 421 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 ENOSF1Q7L5Y1 443 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 VSTM4Q8IW00 320 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SLC35F3Q8IY50 421 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 TMIEQ8NEW7 156 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 OR7D4Q8NG98 312 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 IFT43Q96FT9 208 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 CCDC3Q9BQI4 270 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SPON2Q9BUD6 331 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SIRPGQ9P1W8 387 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 GULP1Q9UBP9 304 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 GGT7Q9UJ14 662 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 HS3ST2Q9Y278 367 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 ITM2BQ9Y287 266 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 SSUH2Q9Y2M2 353 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 PCDHGA8Q9Y5G5 932 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 ACTL7AQ9Y615 435 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 HS3ST3A1Q9Y663 406 aa14.06□□□□□ -0.16
DDX39A-201ENST00000242776 DOPEY2Q9Y3R5 2298 aa14.05□□□□□ -0.16
DDX39A-201ENST00000242776 CCDC187A0A096LP49 1063 aa14.05□□□□□ -0.16
DDX39A-201ENST00000242776 IGLON5A6NGN9 336 aa14.05□□□□□ -0.16
DDX39A-201ENST00000242776 FPGTO14772 594 aa14.05□□□□□ -0.16
DDX39A-201ENST00000242776 CLDN11O75508 207 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms