RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 SLC25A3Q00325 362 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 BMPR2Q13873 1038 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 PCSK7Q16549 785 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 SLC9A4Q6AI14 798 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 CCDC149Q6ZUS6 474 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 BHLHA9Q7RTU4 235 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 PCGF5Q86SE9 256 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 PDZD8Q8NEN9 1154 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 BTN2A3PQ96KV6 586 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 C11orf84Q9BUA3 381 aaPredicted RBP11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 FRMD8P1Q9BZ68 369 aaPredicted RBP11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 ASAH2Q9NR71 780 aa11.9□□□□□ -0.51
TNFAIP1-201ENST00000226225 LOC100653049A0A140TA62 436 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 TCRBV7S3A2A0A539 114 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 RNASEH1O60930 286 aaKnown RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 KRT34O76011 436 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 CNTN5O94779 1100 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 ANPEPP15144 967 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 RPS24P62847 133 aaKnown RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 GPM6BQ13491 265 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 CBX2Q14781 532 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 GRAMD1BQ3KR37 738 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 PPP1R14CQ8TAE6 165 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 FAM81AQ8TBF8 368 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 ING5Q8WYH8 240 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 UXTQ9UBK9 157 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 ATP9BO43861 1147 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 TYROBPO43914 113 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZMPSTE24O75844 475 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 VNN2O95498 520 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 TOP3BO95985 862 aaKnown RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 PTPN7P35236 360 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 MAGEA10P43363 369 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 MLLT6P55198 1093 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 PABPC1LQ4VXU2 614 aaKnown RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 FBXL22Q6P050 247 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 TMC5Q6UXY8 1006 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 CEP128Q6ZU80 1094 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 SATL1Q86VE3 508 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 TREML1Q86YW5 311 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 PSTKQ8IV42 348 aaKnown RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 NPWQ8N729 165 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 PPM1NQ8N819 430 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 MTBPQ96DY7 904 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 OXNAD1Q96HP4 312 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 HERC2P3Q9BVR0 1158 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 MUC3BQ9H195 1237 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 HCFC1R1Q9NWW0 138 aa11.89□□□□□ -0.51
TNFAIP1-201ENST00000226225 MYOCOSA0A1B0GUC4 107 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 PMPCBO75439 489 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 SLC4A1P02730 911 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 PSMB4P28070 264 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 CRADDP78560 199 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 TRIP4Q15650 581 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 SCUBE1Q8IWY4 988 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 CARNMT1Q8N4J0 409 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 C12orf76Q8N812 135 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 DDI1Q8WTU0 396 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 SPATA17Q96L03 361 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 KLHL5Q96PQ7 755 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 ZYG11BQ9C0D3 744 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 TLE6Q9H808 572 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 NDFIP2Q9NV92 336 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 CPQQ9Y646 472 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 H0Y626 953 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 RAMP2O60895 175 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 WEE1P30291 646 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 AIF1P55008 147 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 CDK16Q00536 496 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 TMED1Q13445 227 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 ALFQ53S48 1182 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 CPT1BQ92523 772 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 ANKRD27Q96NW4 1050 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 RNF38Q9H0F5 515 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 RBM22Q9NW64 420 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 IPO11Q9UI26 975 aaKnown RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 LSM7Q9UK45 103 aaKnown RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 ANGPTL2Q9UKU9 493 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 AK5Q9Y6K8 562 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 CBX4O00257 560 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 PRPF4O43172 522 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 TBC1D4O60343 1298 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 PBX2P40425 430 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 AQP5P55064 265 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 MAXP61244 160 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 MORF4L2Q15014 288 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 POLD3Q15054 466 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 MS4A13Q5J8X5 152 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 TCHHL1Q5QJ38 904 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 PIK3R6Q5UE93 754 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 PPP2R2DQ66LE6 453 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 DRICH1Q6PGQ1 229 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 ARHGAP36Q6ZRI8 547 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 IPMKQ8NFU5 416 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 AGR3Q8TD06 166 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 PDCD6IPQ8WUM4 868 aaKnown RBP11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 MPP4Q96JB8 637 aa11.88□□□□□ -0.51
TNFAIP1-201ENST00000226225 SERAC1Q96JX3 654 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms