RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 SLC1A5Q15758 541 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 SH2D5Q6ZV89 423 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 SPATA21Q7Z572 469 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 ZNF567Q8N184 647 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 HASPINQ8TF76 798 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 APOPT1Q96IL0 206 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 HAPLN3Q96S86 360 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 VAT1Q99536 393 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 USB1Q9BQ65 265 aaKnown RBP10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 TKTL2Q9H0I9 626 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 MYLK2Q9H1R3 596 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 MLXIPLQ9NP71 852 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 FAM86C1Q9NVL1 165 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 TMEM161AQ9NX61 479 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 ARL2BPQ9Y2Y0 163 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 STARD13Q9Y3M8 1113 aa10.8□□□□□ -0.68
APOBEC3D-201ENST00000216099 TTC3P53804 2025 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 MIA3Q5JRA6 1907 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 SDR42E2A6NKP2 422 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 ERI2A8K979 691 aaKnown RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 ZNF891A8MT65 544 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 B4GALT3O60512 393 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 KRT37O76014 449 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 POLBP06746 335 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 SNRPAP09012 282 aaKnown RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 JMJD7P0C870 316 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 YY1P25490 414 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 TIE1P35590 1138 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 MAGEA11P43364 429 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 COG7P83436 770 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 NRG1Q02297 640 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 FAAP100Q0VG06 881 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 SNCBQ16143 134 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 PRPF39Q86UA1 669 aaKnown RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 ANKRD13BQ86YJ7 626 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 SAMD14Q8IZD0 417 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 PLD6Q8N2A8 252 aaKnown RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 ARL6IP6Q8N6S5 226 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 STAMBPL1Q96FJ0 436 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 SLC40A1Q9NP59 571 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 STARD7Q9NQZ5 370 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 MOCS1Q9NZB8 636 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 GPSM3Q9Y4H4 160 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 MICAL3Q7RTP6 2002 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 AMHP03971 560 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 SELPP16109 830 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 ZNF24P17028 368 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 PTPN3P26045 913 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 SLC5A3P53794 718 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 MTM1Q13496 603 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 FRG1Q14331 258 aaKnown RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 PPP2R5DQ14738 602 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 ARHGEF6Q15052 776 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 MSANTD2Q6P1R3 559 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 MARK2Q7KZI7 788 aaKnown RBP10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 LRRC8DQ7L1W4 858 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 ZNF280BQ86YH2 543 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 KLHDC8BQ8IXV7 354 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 CCNYQ8ND76 341 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 CCDC138Q96M89 665 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 VPS11Q9H270 941 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 TBC1D13Q9NVG8 400 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 OR12D3Q9UGF7 316 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 ITGB1BP2Q9UKP3 347 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 PCDHB5Q9Y5E4 795 aa10.79□□□□□ -0.68
APOBEC3D-201ENST00000216099 SCN5AQ14524 2016 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 FGF10O15520 208 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 AP1G1O43747 822 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 PLOD3O60568 738 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 DHRS4L1P0CG22 281 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 PGAM1P18669 254 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 XPAP23025 273 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 PSMB4P28070 264 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 GARSP41250 739 aaKnown RBP10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 TRIP4Q15650 581 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 RASIP1Q5U651 963 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 RNF43Q68DV7 783 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 ITPRIPL1Q6GPH6 555 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 CGB2Q6NT52 195 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 TRPM8Q7Z2W7 1104 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 CTU1Q7Z7A3 348 aaKnown RBP10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 CHSY1Q86X52 802 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 TRIM42Q8IWZ5 723 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 MPP5Q8N3R9 675 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 CCDC33Q8N5R6 958 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 NPWQ8N729 165 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 PPM1NQ8N819 430 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 ST13P5Q8NFI4 369 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 MAGEC3Q8TD91 643 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 LRRC8CQ8TDW0 803 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 TTC17Q96AE7 1141 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 UBXN10Q96LJ8 280 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 PPM1MQ96MI6 270 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 TSGA13Q96PP4 275 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 NUDT16L1Q9BRJ7 211 aaKnown RBP10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 GBA3Q9H227 469 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 HAUS2Q9NVX0 235 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 GPRC5BQ9NZH0 403 aa10.78□□□□□ -0.68
APOBEC3D-201ENST00000216099 LMCD1Q9NZU5 365 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms