RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gpd1lQ3ULJ0 351 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tnfaip2Q61333 691 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 B130006D01RikQ8BRH6 153 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Slc18a2Q8BRU6 517 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mrpl38Q8K2M0 380 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Usp11Q99K46 921 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Acot13Q9CQR4 140 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ddx47Q9CWX9 455 aaKnown RBP10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 4930548H24RikQ9D496 437 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Znrf4Q9DAH2 327 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fbxl12Q9EPX5 326 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 EefsecQ9JHW4 583 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cog1Q9Z160 980 aa10.08□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tnrc18Q80WC3 2878 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nxpe3B9EKK6 559 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 GmlE9PX31 176 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm4450E9Q007 373 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Serpine3E9Q6A2 401 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfp94E9Q6Y4 486 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm8108K7N734 216 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm3424L7N298 263 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm8246M0QWX9 263 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fpr-rs3O88537 343 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Lrrc6O88978 473 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gap43P06837 227 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 PfklP12382 780 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gsta4P24472 222 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Wnt3aP27467 352 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nudt18Q3U2V3 323 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fam189bQ5HZJ5 669 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pde1aQ61481 565 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Hsd3b4Q61767 373 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cdkn3Q810P3 211 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cplx3Q8R1B5 158 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 TarsQ9D0R2 722 aaKnown RBP10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Duoxa2Q9D311 320 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rpn2Q9DBG6 631 aaKnown RBP10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Lman2Q9DBH5 358 aaKnown RBP10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mpp5Q9JLB2 675 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr742A2RTP5 311 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm20431E9PY39 371 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nsmce4aG3XA30 381 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 HcrtO55241 130 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 P01810 119 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Got2P05202 430 aaKnown RBP10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Defa-rs12P50716 91 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Dsc1P55849 886 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gabpb1Q00420 383 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sap25Q1EHW4 186 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfp607aQ3TQG9 686 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ccdc34Q3UI66 367 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cog7Q3UM29 770 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Krt42Q6IFX2 452 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Slc39a10Q6P5F6 833 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 SrlQ7TQ48 910 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr366Q7TRY4 309 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 St13Q99L47 371 aaKnown RBP10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ogfod2Q9CQ04 349 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Syf2Q9D198 242 aaKnown RBP10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sec13Q9D1M0 322 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sept6Q9R1T4 434 aa10.07□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Igkv5-39A0A0G2JDV4 115 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfp811A0A0J9YU71 552 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ddx43D3Z6P9 646 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Vmn2r86G5E8Y4 848 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Vmn2r70K7N702 854 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm2888K7N746 267 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Limk2O54785 638 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 PolP11369 1281 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 TecP24604 630 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tlx1P43345 332 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Colec11Q3SXB8 272 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zmym5Q3U2E2 627 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Trcg1Q58Y74 825 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 DgkqQ6P5E8 934 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rimbp2Q80U40 1072 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ccdc181Q80ZU5 509 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fam72aQ8BFZ8 149 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Q8C4P0 716 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pnpla8Q8K1N1 776 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Decr1Q9CQ62 335 aaKnown RBP10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Riok3Q9DBU3 519 aaKnown RBP10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 IgtpQ9DCE9 423 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 C1qtnf1Q9QXP7 281 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr271-ps1A0A1L1SQH2 283 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm21962L7N280 338 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nos2P29477 1144 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ncf4P97369 339 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ermp1Q3UVK0 898 aaKnown RBP10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fam167aQ6P1G6 215 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Dsg1bQ7TSF1 1060 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Camk1dQ8BW96 385 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nop56Q9D6Z1 580 aaKnown RBP10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fam83dQ9D7I8 585 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Unc80Q8BLN6 3261 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ankfn1A0A140LIW7 1083 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ism2D3Z6A3 493 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm7275E9Q1B3 247 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Prr22F6TNE3 422 aa10.06□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Znf683I7HJS4 458 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms