RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tecpr1Q80VP0 1166 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tmem121Q80XA0 318 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mospd1Q8VEL0 213 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PirQ9D711 290 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Dus2Q9D7B1 493 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Itgb1bp2Q9R000 350 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cdc42ep5Q9Z0X0 150 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Znf536Q8K083 1302 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pcdh7A0A0A6YY83 1255 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vmn1r3A2AMT7 306 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm6133B2RY53 190 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fam71e2L7N480 754 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 DmpkP54265 631 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cntn3Q07409 1028 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pik3r6Q3U6Q4 756 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 BtrcQ3ULA2 605 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm1587Q3UT80 123 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 P2rx5Q3UYI1 455 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Kcna4Q61423 654 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Utp14bQ6EJB6 756 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Casc4Q6P2L7 435 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Exd1Q8CDF7 570 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ablim1Q8K4G5 861 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vmn1r79Q8R285 306 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cox18Q8VC74 331 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Prkag2Q91WG5 566 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ndc80Q9D0F1 642 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Clvs1Q9D4C9 354 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Paqr5Q9DCU0 330 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Racgap1Q9WVM1 628 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Aldoart1A6ZI46 419 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Supt3B0QZW4 406 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pramef20B1ARV6 477 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Rrn3B2RS91 656 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 FgaE9PV24 789 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Inpp5aE9QAS7 422 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Lrrc23O35125 340 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Ap2a1P17426 977 aaKnown RBP9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Ptger1P35375 405 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Defa8P50706 81 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Rab10P61027 200 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Aldh1a2Q62148 518 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Itga3Q62470 1053 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 EfsQ64355 560 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Far2Q7TNT2 515 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Aph1bQ8C7N7 257 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Sgpl1Q8R0X7 568 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Unc93b1Q8VCW4 598 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Sgip1Q8VD37 806 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr1352Q8VGX5 309 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pex6Q99LC9 981 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Slamf8Q9D3G2 278 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Eif4e3Q9DBB5 207 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Fut2Q9JL27 347 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 VapbQ9QY76 243 aaKnown RBP9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Msl3Q9WVG9 525 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Cntnap5aQ0V8T9 1304 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 2310061I04RikB8JJ69 315 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 DgkdE9PUQ8 1220 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Herc6F2Z461 1003 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Mup13L7N222 235 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Dnmt3aO88508 908 aaKnown RBP9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 AlbP07724 608 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 LynP25911 512 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Slc6a13P31649 602 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Ranbp9P69566 653 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Hddc2Q3SXD3 199 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Vps51Q3UVL4 782 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Arhgap30Q640N3 1101 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Ints7Q7TQK1 966 aaKnown RBP9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Got1l1Q7TSV6 404 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Zfp418Q8BFS8 652 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Cgrrf1Q8BMJ7 332 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tmem220Q8BP07 167 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Rab36Q8CAM5 267 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Samd4aQ8CBY1 711 aaKnown RBP9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Hectd2Q8CDU6 774 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 NeproQ8R2U2 564 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Exd2Q8VEG4 650 aaKnown RBP9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Olfr1494Q8VGP8 315 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 PigxQ99LV7 254 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 CinpQ9D0V8 212 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tmem174Q9DCX7 243 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pidd1Q9ERV7 915 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Asah2Q9JHE3 756 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 ApipQ9WVQ5 241 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Slfn2Q9Z0I6 378 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 MycsQ9Z304 431 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Cacna1fQ9JIS7 1985 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pramef17A2ASJ1 475 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 HunkO88866 714 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 GsrP47791 500 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 GemP55041 295 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Gabpb1Q00420 383 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pde1aQ61481 565 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Abcg2Q7TMS5 657 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 WtipQ7TQJ8 398 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Krt75Q8BGZ7 551 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Tmtc3Q8BRH0 920 aa9.83□□□□□ -0.84
Pcdh1-201ENSMUST00000057185 Pyhin1Q8BV49 420 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms