RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Zscan12Q9Z1D7 501 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Zbed5B2RPU8 756 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Zfp384E9Q1A5 584 aaKnown RBP15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 XntrpcF8VQM8 1264 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Cyp2b19O55071 492 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Top3aO70157 1003 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Chrna4O70174 629 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Krt4P07744 525 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Psmd3P14685 530 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Ccnd3P30282 292 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Rpl36P47964 105 aaKnown RBP15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Rab10P61027 200 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Nfe2Q07279 373 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Pla2g4dQ50L43 825 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Nr1h2Q60644 446 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Cntn4Q69Z26 1026 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Hsfy2Q80Y37 392 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Fam49aQ8BHZ0 323 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Arhgap28Q8BN58 729 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Gfm2Q8R2Q4 779 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Ctu1Q99J10 420 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Tomm70Q9CZW5 611 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Klhdc8bQ9D2D9 354 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 Chmp2aQ9DB34 222 aa15.17■□□□□ 0.02
Nup54-201ENSMUST00000038514 TpteG5E8H5 664 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Sbk3P0C5K0 361 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Treml2Q2LA85 329 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Micall2Q3TN34 1009 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Syce1lQ5D525 247 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Mfsd3Q5U419 412 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Arrdc3Q7TPQ9 414 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Slc44a2Q8BY89 706 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Slc30a5Q8R4H9 761 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Sec16bQ91XT4 1051 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Zfp64Q99KE8 643 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Lrrc4Q99PH1 652 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 GarsQ9CZD3 729 aaKnown RBP15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Batf3Q9D275 118 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Hmgn3Q9DCB1 99 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Extl1Q9JKV7 669 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Arid3bQ9Z1N7 568 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Kcnq2Q9Z351 759 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Znf683I7HJS4 458 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Sptlc1O35704 473 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Psmc3O88685 442 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 P01740 135 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Mmp3P28862 477 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 TankP70347 448 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Txnl4aP83877 142 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 1700061G19RikQ08EE8 705 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Gm5431Q5NCB3 844 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Etaa1Q5SVT3 877 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Far2Q7TNT2 515 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 4930503B20RikQ80ZP0 234 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 SvopQ8BFT9 548 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 EmsyQ8BMB0 1264 aaKnown RBP15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 OsgepQ8BWU5 335 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Prr33Q8C494 260 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Tmem154Q8C4Q9 181 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Rab15Q8K386 212 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Stard13Q923Q2 1113 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Dhrs1Q99L04 313 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Arhgap8Q9CXP4 425 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 P2yr13Q9D8I2 337 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Q9D979 236 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Mettl7bQ9DD20 244 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Stx12Q9ER00 274 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Slamf1Q9QUM4 343 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Nrf1Q9WU00 503 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Tbk1Q9WUN2 729 aa15.16■□□□□ 0.02
Nup54-201ENSMUST00000038514 Kcnt2D3Z649 1135 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Vmn2r74E9PW21 853 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Gm3336J3QMQ6 198 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Gm3383J3QQ59 259 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Gm3164L7N2B9 238 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Gm3239L7N2D9 227 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Aarsd1Q3THG9 412 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Zfp217Q3U0X6 1041 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Ankrd13bQ5F259 626 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Krt32Q62168 407 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 DseQ8BLI4 958 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 VcpkmtQ8C436 228 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Ppp6r2Q8R3Q2 923 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Snx9Q91VH2 595 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Golm1Q91XA2 393 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 MrgpreQ91ZB7 310 aa15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 VarsQ9Z1Q9 1263 aaKnown RBP15.15■□□□□ 0.02
Nup54-201ENSMUST00000038514 Trdmt1O55055 415 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 P01668 110 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Adra1dP97714 562 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Hbq1bQ3U0A6 142 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Arcn1Q5XJY5 511 aaKnown RBP15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Nqo1Q64669 274 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Fastkd1Q6DI86 829 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Rslcan18Q7M6X5 460 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Pcid2Q8BFV2 399 aaKnown RBP15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Lig4Q8BTF7 911 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Itpk1Q8BYN3 419 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Timd2Q8R183 305 aa15.14■□□□□ 0.01
Nup54-201ENSMUST00000038514 Tmprss4Q8VCA5 435 aa15.14■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms