RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Zfp607bG3X9H3 648 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hps1O08983 704 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 MutP16332 748 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hmgcs2P54869 508 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Snrpd1P62315 119 aaKnown RBP9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 HnrnpdQ60668 355 aaKnown RBP9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vsx2Q61412 361 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zbtb33Q8BN78 671 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kat5Q8CHK4 513 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pkn3Q8K045 878 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr393Q8VGR6 312 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Setd7Q8VHL1 366 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tmed11Q9D2R4 215 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 HaghlQ9DB32 283 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gria3Q9Z2W9 888 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm13078A2AGW8 474 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Bmp2P21274 394 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Adra1dP97714 562 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mgat3Q10470 538 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kctd8Q50H33 476 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cyb5d1Q5NCY3 228 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc29a2Q61672 456 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 ChpfQ6IQX7 774 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Atxn2lQ7TQH0 1049 aaKnown RBP9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tmc7Q8C428 726 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Samd4aQ8CBY1 711 aaKnown RBP9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ace2Q8R0I0 805 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pcdhac1Q91Y10 964 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Npm3Q9CPP0 175 aaKnown RBP9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ern1Q9EQY0 977 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Panx1Q9JIP4 426 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kiaa1210E9Q0C6 1637 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Knl1Q66JQ7 1612 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fkbp8O35465 402 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mdm4O35618 489 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Anxa3O35639 323 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 HunkO88866 714 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fgfr2P21803 821 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ptpn12P35831 775 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Epb42P49222 691 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cct3P80318 545 aaKnown RBP9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Spout1Q3UHX9 385 aaKnown RBP9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dph1Q5NCQ5 438 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Adora2aQ60613 410 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fbxo42Q6PDJ6 717 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Trit1Q80UN9 467 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pqlc1Q80XM9 271 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc39a11Q8BWY7 342 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 RybpQ8CCI5 228 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Inpp5bQ8K337 993 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vmn1r218Q8R261 298 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 DolkQ8R2Y3 534 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Aspscr1Q8VBT9 550 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pcdha1Q91Y21 948 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Piwil1Q9JMB7 862 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr564E9PWA8 316 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 H2-Q1O19441 368 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gas2P11862 314 aaKnown RBP9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Htr2cP34968 459 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cdh4P39038 913 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ddr1Q03146 911 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Q32M26 199 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 CttnQ60598 546 aaKnown RBP9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lcn3Q62471 182 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tas2r102Q7M717 329 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lats2Q7TSJ6 1042 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zswim6Q80TB7 1207 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 GskipQ8BGR8 139 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Arhgef33Q8BW86 850 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Serpina11Q8CIE0 424 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ubqln1Q8R317 582 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Znf24Q91VN1 368 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Adcy4Q91WF3 1077 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Nphs2Q91X05 385 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pcdhgb1Q91XX8 918 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Asb11Q9CQ31 323 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zcchc12Q9CZA5 402 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Krt81Q9ERE2 481 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm44511A0A0N4SW10 223 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 UprtB1AVZ0 310 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm8180E9PXN0 145 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rhox13F6YCR7 232 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mup13L7N222 235 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kcnu1O54982 1121 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 AladP10518 330 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 DbtP53395 482 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tbc1d10aP58802 500 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Nkx2-3P97334 362 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Snai1Q02085 264 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc16a10Q3U9N9 512 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gpr65Q61038 337 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Capn3Q64691 821 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fbxo10Q7TQF2 950 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Susd6Q8BGE4 302 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Klhl24Q8BRG6 600 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PpatQ8CIH9 517 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Sirt2Q8VDQ8 389 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Epn3Q91W69 636 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Akr1c21Q91WR5 323 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pcdhb3Q91XZ7 784 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms