RNA–Protein interactions for RNA: ENST00000641759.1

MTHFR-215, Transcript of methylenetetrahydrofolate reductase, human

Gene MTHFR, Length 2,454 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTHFR-215	ENST00000641759	GJA5	P36382	358 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	DAOA	P59103	153 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	CDH17	Q12864	832 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	PRKAA1	Q13131	559 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	PPIL2	Q13356	520 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	PRAMEF19	Q5SWL8	479 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	SPATA24	Q86W54	205 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	RNF135	Q8IUD6	432 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	SNX31	Q8N9S9	440 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	IPMK	Q8NFU5	416 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	PIP4K2C	Q8TBX8	421 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	NCSTN	Q92542	709 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	RNF34	Q969K3	372 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	HDAC11	Q96DB2	347 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	KLHL32	Q96NJ5	620 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	SMO	Q99835	787 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	RHOJ	Q9H4E5	214 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	SLC2A6	Q9UGQ3	507 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	PRPF19	Q9UMS4	504 aa	Known RBP	12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	LZTS1	Q9Y250	596 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	ACOT9	Q9Y305	439 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	COPG1	Q9Y678	874 aa	Known RBP	12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	AP4B1	Q9Y6B7	739 aa		12.8	□□□□□ -0.36
MTHFR-215	ENST00000641759	PLXNA1	Q9UIW2	1896 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	CCDC160	A6NGH7	325 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	NCAM2	O15394	837 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	CLPTM1	O96005	669 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	TFAP2A	P05549	437 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SMIM18	P0DKX4	95 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SMIM10L2A	P0DMW4	78 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SMIM10L2B	P0DMW5	78 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SLC12A1	Q13621	1099 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SNX17	Q15036	470 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SLC5A9	Q2M3M2	681 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SH2D4B	Q5SQS7	431 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	RARS2	Q5T160	578 aa	Known RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	LRRC8E	Q6NSJ5	796 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	LIMS2	Q7Z4I7	341 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	PCDH20	Q8N6Y1	951 aa	Known RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	STYX	Q8WUJ0	223 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	KCTD13	Q8WZ19	329 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	LENG1	Q96BZ8	264 aa	Predicted RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	PCED1B	Q96HM7	432 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	EFCAB1	Q9HAE3	211 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	ZBTB26	Q9HCK0	441 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	VCX3A	Q9NNX9	186 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	ADARB2	Q9NS39	739 aa	Known RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	ADA2	Q9NZK5	511 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	TRHDE	Q9UKU6	1024 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	GNE	Q9Y223	722 aa	Known RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	IPP	Q9Y573	584 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SHROOM3	Q8TF72	1996 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	ERI2	A8K979	691 aa	Known RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	TARM1	B6A8C7	271 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	H2AFY	O75367	372 aa	Known RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	PGK1	P00558	417 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	PIM1	P11309	404 aa	Predicted RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	HDC	P19113	662 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	ME2	P23368	584 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	WARS	P23381	471 aa	Known RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	CDKL1	Q00532	357 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	GALNT2	Q10471	571 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	LSAMP	Q13449	338 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	DUSP28	Q4G0W2	176 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	UBXN11	Q5T124	520 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	TSTD2	Q5T7W7	516 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	ITPRIPL1	Q6GPH6	555 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	ZMIZ2	Q8NF64	920 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	HAPLN3	Q96S86	360 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	SLC9A7	Q96T83	725 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	UBE2O	Q9C0C9	1292 aa	Known RBP	12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	PCDHAC1	Q9H158	963 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	CYP4F12	Q9HCS2	524 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	CHST12	Q9NRB3	414 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	RIMS3	Q9UJD0	308 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	COMMD3-BMI1	R4GMX3	469 aa		12.79	□□□□□ -0.36
MTHFR-215	ENST00000641759	TCAF2	A6NFQ2	919 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	KCNU1	A8MYU2	1149 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	AURKA	O14965	403 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	TREH	O43280	583 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	DENR	O43583	198 aa	Known RBP	12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	TRPA1	O75762	1119 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	APOA4	P06727	396 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	KCNE1	P15382	129 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	ADGRE1	Q14246	886 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	NRF1	Q16656	503 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	ARL13B	Q3SXY8	428 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	NAPEPLD	Q6IQ20	393 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	RBM44	Q6ZP01	1051 aa	Known RBP	12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	GK5	Q6ZS86	529 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	PGAM4	Q8N0Y7	254 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	MARVELD2	Q8N4S9	558 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	KDM1B	Q8NB78	822 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	SMG8	Q8ND04	991 aa	Known RBP	12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	NTAN1	Q96AB6	310 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	PRPF18	Q99633	342 aa	Known RBP	12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	EPAS1	Q99814	870 aa		12.78	□□□□□ -0.36
MTHFR-215	ENST00000641759	GRIP2	Q9C0E4	1043 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms