RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SLC17A7Q9P2U7 560 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ASB3Q9Y575 518 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 USP3Q9Y6I4 520 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PTGESO14684 152 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PENKP01210 267 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 URODP06132 367 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 HOXC13P31276 330 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 OCRLQ01968 901 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CUL3Q13618 768 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 KCNA10Q16322 511 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 FAM171A1Q5VUB5 890 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 IL31Q6EBC2 164 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 IRGCQ6NXR0 463 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ZYG11AQ6WRX3 759 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 LRRC8DQ7L1W4 858 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF276Q8N554 614 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TDRD5Q8NAT2 981 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SERAC1Q96JX3 654 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 GPR22Q99680 433 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 RUVBL2Q9Y230 463 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TIMM13Q9Y5L4 95 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ADAMTSL1Q8N6G6 1762 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ZBTB24O43167 697 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PMPCBO75439 489 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 VAPBO95292 243 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PGK1P00558 417 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 RECQLP46063 649 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 EPHB3P54753 998 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PPARDQ03181 441 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 GALNT1Q10472 559 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CYLC2Q14093 348 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CERS6Q6ZMG9 384 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 AGMOQ6ZNB7 445 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 STAG3L4Q8TBR4 150 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 MICAL1Q8TDZ2 1067 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 USP33Q8TEY7 942 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ISL2Q96A47 359 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 NAF1Q96HR8 494 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SPATA17Q96L03 361 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ZFP42Q96MM3 310 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TTPALQ9BTX7 342 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 C10orf88Q9H8K7 445 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 UBA2Q9UBT2 640 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 E9PAM4 449 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 OR1E1P30953 314 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 RFC2P35250 354 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 BRCC3P46736 316 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ACAP2Q15057 778 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 GBP5Q96PP8 586 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SPON2Q9BUD6 331 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ZCWPW1Q9H0M4 648 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CDH19Q9H159 772 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 KIF9Q9HAQ2 790 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 GOLGA2P5Q9HBQ8 144 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ALG13Q9NP73 1137 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SLCO1B3Q9NPD5 702 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 INTS10Q9NVR2 710 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TMEM45AQ9NWC5 275 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 PPEF2O14830 753 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ANP32DO95626 131 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 WNT3AP56704 352 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 KDSRQ06136 332 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MAD2L1Q13257 205 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 WLSQ5T9L3 541 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SAPCD2Q86UD0 394 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 NPAS4Q8IUM7 802 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TMEM126BQ8IUX1 230 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CNTD1Q8N815 330 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 GIPC2Q8TF65 315 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MRPS31Q92665 395 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 RTKNQ9BST9 563 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TMEM248Q9NWD8 314 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 STX18Q9P2W9 335 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MAPRE3Q9UPY8 281 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 PKP3Q9Y446 797 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ANGPTL3Q9Y5C1 460 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CCDC195A0A1B0GUA6 201 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MAGEA13PA6NCF6 341 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 E5RI56 91 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 QSOX1O00391 747 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TM7SF2O76062 418 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 BAG2O95816 211 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ARL1P40616 181 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SOX4Q06945 474 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CRHR2Q13324 411 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MED21Q13503 144 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CCDC142Q17RM4 750 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 GDF6Q6KF10 455 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ARNT2Q9HBZ2 717 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CHKBQ9Y259 395 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CFAP99D6REC4 459 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SPTLC1O15269 473 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SRP72O76094 671 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 KITP10721 976 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 IKBKEQ14164 716 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SYPL2Q5VXT5 272 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 BNC2Q6ZN30 1099 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CCDC149Q6ZUS6 474 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms