RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 HS3ST2Q9Y278 367 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 TMCC1O94876 653 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 APRTP07741 180 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 FAM153BP0C7A2 387 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 CR2P20023 1033 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 EIF2DP41214 584 aaKnown RBP15.42■□□□□ 0.06
CBWD1-225ENST00000616944 CTSOP43234 321 aaPredicted RBP15.42■□□□□ 0.06
CBWD1-225ENST00000616944 GEMIN4P57678 1058 aaKnown RBP15.42■□□□□ 0.06
CBWD1-225ENST00000616944 MAXP61244 160 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 NR1H3Q13133 447 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 ZNF235Q14590 738 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 IHHQ14623 411 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 AAK1Q2M2I8 961 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 ITPRIPL2Q3MIP1 535 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 FAM153CQ494X1 144 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 PTCRAQ6ISU1 281 aaPredicted RBP15.42■□□□□ 0.06
CBWD1-225ENST00000616944 RETSATQ6NUM9 610 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 TSEN2Q8NCE0 465 aaKnown RBP15.42■□□□□ 0.06
CBWD1-225ENST00000616944 ARRDC2Q8TBH0 407 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 NXPE3Q969Y0 559 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 TADA1Q96BN2 335 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 IMP4Q96G21 291 aaKnown RBP15.42■□□□□ 0.06
CBWD1-225ENST00000616944 SLC25A51Q9H1U9 297 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 KCNK12Q9HB15 430 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 FAM153AQ9UHL3 310 aa15.42■□□□□ 0.06
CBWD1-225ENST00000616944 F5H423 210 aaPredicted RBP15.41■□□□□ 0.06
CBWD1-225ENST00000616944 MMP2P08253 660 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 RGRP47804 291 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 SLC6A11P48066 632 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 CDK16Q00536 496 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 SULT2A1Q06520 285 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 SLC20A2Q08357 652 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 NIPAL4Q0D2K0 466 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 CBLBQ13191 982 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 SYCP2LQ5T4T6 812 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 MBLAC2Q68D91 279 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 NAIF1Q69YI7 327 aaPredicted RBP15.41■□□□□ 0.06
CBWD1-225ENST00000616944 ZNF534Q76KX8 674 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 PRPF39Q86UA1 669 aaKnown RBP15.41■□□□□ 0.06
CBWD1-225ENST00000616944 ZCCHC9Q8N567 271 aaKnown RBP15.41■□□□□ 0.06
CBWD1-225ENST00000616944 WFIKKN2Q8TEU8 576 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 CINPQ9BW66 212 aaPredicted RBP15.41■□□□□ 0.06
CBWD1-225ENST00000616944 POLR1EQ9GZS1 481 aaKnown RBP15.41■□□□□ 0.06
CBWD1-225ENST00000616944 BRD9Q9H8M2 597 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 TRPV5Q9NQA5 729 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 DEC1Q9P2X7 70 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 LHX3Q9UBR4 397 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 TTLL3Q9Y4R7 772 aa15.41■□□□□ 0.06
CBWD1-225ENST00000616944 ERI2A8K979 691 aaKnown RBP15.4■□□□□ 0.06
CBWD1-225ENST00000616944 K7ERQ8 282 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 SMAD6O43541 496 aaKnown RBP15.4■□□□□ 0.06
CBWD1-225ENST00000616944 ZNF821O75541 412 aaPredicted RBP15.4■□□□□ 0.06
CBWD1-225ENST00000616944 SUN1O94901 812 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 SLC34A2O95436 690 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 AP2A1O95782 977 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 SRCP12931 536 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 HSPA9P38646 679 aaKnown RBP15.4■□□□□ 0.06
CBWD1-225ENST00000616944 STK19P49842 368 aaPredicted RBP15.4■□□□□ 0.06
CBWD1-225ENST00000616944 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
CBWD1-225ENST00000616944 TFF2Q03403 129 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 EMBQ6PCB8 327 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 METTL3Q86U44 580 aaKnown RBP15.4■□□□□ 0.06
CBWD1-225ENST00000616944 BBS5Q8N3I7 341 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 SH2D3CQ8N5H7 860 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 PDCD7Q8N8D1 485 aaKnown RBP15.4■□□□□ 0.06
CBWD1-225ENST00000616944 MCUQ8NE86 351 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 SPATA22Q8NHS9 363 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 CAVIN3Q969G5 261 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 MYO19Q96H55 970 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 PWWP2AQ96N64 755 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 TXLNGYQ9BZA5 131 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 LIMD1Q9UGP4 676 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 CKAP5Q14008 2032 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 BPTFQ12830 3046 aa15.4■□□□□ 0.06
CBWD1-225ENST00000616944 PRRT4C9JH25 899 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 GJB3O75712 270 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 NEBLO76041 1014 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 MT-CYBP00156 380 aaPredicted RBP15.39■□□□□ 0.05
CBWD1-225ENST00000616944 IL9P15248 144 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 MAGEA3P43357 314 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 ECT2LQ008S8 904 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 DSC2Q02487 901 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 NSUN2Q08J23 767 aaKnown RBP eCLIP15.39■□□□□ 0.05
CBWD1-225ENST00000616944 SLC14A2Q15849 920 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 PUS10Q3MIT2 529 aaKnown RBP15.39■□□□□ 0.05
CBWD1-225ENST00000616944 MAP9Q49MG5 647 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 BEND6Q5SZJ8 279 aaPredicted RBP15.39■□□□□ 0.05
CBWD1-225ENST00000616944 GRAMD4Q6IC98 578 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 KDELC1Q6UW63 502 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 CAND1Q86VP6 1230 aaKnown RBP15.39■□□□□ 0.05
CBWD1-225ENST00000616944 SLC44A3Q8N4M1 653 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 TERB1Q8NA31 727 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 TTC8Q8TAM2 541 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 RPL10LQ96L21 214 aaKnown RBP15.39■□□□□ 0.05
CBWD1-225ENST00000616944 MRGPRX3Q96LB0 322 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 NSMCE3Q96MG7 304 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 SERPINB12Q96P63 405 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 PPP1R2P1Q96PQ5 205 aa15.39■□□□□ 0.05
CBWD1-225ENST00000616944 FOXP3Q9BZS1 431 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms