RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 DCAF4L2Q8NA75 395 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 C1orf131Q8NDD1 294 aaKnown RBP23.93■■□□□ 1.42
MMP28-203ENST00000612672 NELFBQ8WX92 580 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 VOPP1Q96AW1 172 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 PPP1R9BQ96SB3 815 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 SLC17A9Q9BYT1 436 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 USP29Q9HBJ7 922 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 MPP6Q9NZW5 540 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 GGT7Q9UJ14 662 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 AJAP1Q9UKB5 411 aaPredicted RBP23.93■■□□□ 1.42
MMP28-203ENST00000612672 CTNND2Q9UQB3 1225 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 FADS3Q9Y5Q0 445 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 HS3ST3A1Q9Y663 406 aa23.93■■□□□ 1.42
MMP28-203ENST00000612672 TLN1Q9Y490 2541 aaKnown RBP23.92■■□□□ 1.42
MMP28-203ENST00000612672 CDRT15L2A8MXV6 281 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 K7ENP7 123 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 M0QYT0 321 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 AFPP02771 609 aaKnown RBP23.92■■□□□ 1.42
MMP28-203ENST00000612672 DUSP3P51452 185 aaPredicted RBP23.92■■□□□ 1.42
MMP28-203ENST00000612672 STX17P56962 302 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 KRT83P78385 493 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 EIF2B5Q13144 721 aaKnown RBP23.92■■□□□ 1.42
MMP28-203ENST00000612672 PTPN20Q4JDL3 420 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 ZCCHC8Q6NZY4 707 aaKnown RBP23.92■■□□□ 1.42
MMP28-203ENST00000612672 INO80CQ6PI98 192 aaPredicted RBP23.92■■□□□ 1.42
MMP28-203ENST00000612672 PARS2Q7L3T8 475 aaKnown RBP23.92■■□□□ 1.42
MMP28-203ENST00000612672 CCDC34Q96HJ3 373 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 C2orf49Q9BVC5 232 aaPredicted RBP23.92■■□□□ 1.42
MMP28-203ENST00000612672 DUSP23Q9BVJ7 150 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 DYRK4Q9NR20 520 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 ARHGEF38Q9NXL2 777 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 ZNF212Q9UDV6 495 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 SCN8AQ9UQD0 1980 aa23.92■■□□□ 1.42
MMP28-203ENST00000612672 AHCTF1Q8WYP5 2266 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 NEMP2A6NFY4 417 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 ADRB3P13945 408 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 CLN3Q13286 438 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 EFHC1Q5JVL4 640 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 PARGQ86W56 976 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 CRACR2AQ9BSW2 395 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 TKTL2Q9H0I9 626 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 ITM2BQ9Y287 266 aa23.91■■□□□ 1.42
MMP28-203ENST00000612672 FARP1Q9Y4F1 1045 aaPredicted RBP23.91■■□□□ 1.42
MMP28-203ENST00000612672 LRP4O75096 1905 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 FAM170AA1A519 330 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 EME2A4GXA9 379 aaPredicted RBP23.9■■□□□ 1.42
MMP28-203ENST00000612672 AQP9O43315 295 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 GCATO75600 419 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 ZMPSTE24O75844 475 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 ABL2P42684 1182 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 CXCR3P49682 368 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 NEK3P51956 506 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 MARSP56192 900 aaKnown RBP23.9■■□□□ 1.42
MMP28-203ENST00000612672 PDE1CQ14123 709 aaPredicted RBP23.9■■□□□ 1.42
MMP28-203ENST00000612672 ARHGAP44Q17R89 818 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 FOXR1Q6PIV2 292 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 C11orf57Q6ZUT1 292 aaPredicted RBP23.9■■□□□ 1.42
MMP28-203ENST00000612672 SLC26A9Q7LBE3 791 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 MED8Q96G25 268 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 CCDC114Q96M63 670 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 NPY6RQ99463 290 aa23.9■■□□□ 1.42
MMP28-203ENST00000612672 LRRK1Q38SD2 2015 aa23.89■■□□□ 1.42
MMP28-203ENST00000612672 FLNCQ14315 2725 aa23.89■■□□□ 1.42
MMP28-203ENST00000612672 DRGXA6NNA5 263 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 EFSO43281 561 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 CD160O95971 181 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 SLC9A1P19634 815 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 ITGB7P26010 798 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 GKP32189 559 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 CLCN6P51797 869 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 RPS21P63220 83 aaKnown RBP23.89■■□□□ 1.41
MMP28-203ENST00000612672 ARF5P84085 180 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 STIM1Q13586 685 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 KIAA1161Q6NSJ0 714 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 TRIM65Q6PJ69 517 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 DCP2Q8IU60 420 aaKnown RBP23.89■■□□□ 1.41
MMP28-203ENST00000612672 SLC35F3Q8IY50 421 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 LMX1AQ8TE12 382 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 CLMPQ9H6B4 373 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 PLCB1Q9NQ66 1216 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 PCDHGC3Q9UN70 934 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 PCDHGA8Q9Y5G5 932 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.89■■□□□ 1.41
MMP28-203ENST00000612672 CSNK1G3Q9Y6M4 447 aa23.89■■□□□ 1.41
MMP28-203ENST00000612672 IGLON5A6NGN9 336 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 MUSKO15146 869 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 PNMA6AP0CW24 399 aaPredicted RBP23.88■■□□□ 1.41
MMP28-203ENST00000612672 JUNDP17535 347 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 RBMS1P29558 406 aaKnown RBP23.88■■□□□ 1.41
MMP28-203ENST00000612672 L1CAMP32004 1257 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 NOS2P35228 1153 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 USP8P40818 1118 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 SLC6A3Q01959 620 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 C1orf61Q13536 156 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 RBM44Q6ZP01 1051 aaKnown RBP23.88■■□□□ 1.41
MMP28-203ENST00000612672 SETD3Q86TU7 594 aaPredicted RBP23.88■■□□□ 1.41
MMP28-203ENST00000612672 BOCQ9BWV1 1114 aa23.88■■□□□ 1.41
MMP28-203ENST00000612672 FCF1Q9Y324 198 aaKnown RBP23.88■■□□□ 1.41
MMP28-203ENST00000612672 IGLV3-10A0A075B6K4 115 aa23.87■■□□□ 1.41
MMP28-203ENST00000612672 SLC28A2O43868 658 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms