RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 HOXB2P14652 356 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ITIH2P19823 946 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 NR1D1P20393 614 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 IVDP26440 423 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 MZF1P28698 734 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ETFBP38117 255 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 IL12RB1P42701 662 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ZNF234Q14588 700 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 SLMAPQ14BN4 828 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 TMEM92Q6UXU6 159 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 CYP4V2Q6ZWL3 525 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-217ENST00000611848 TFAP2DQ7Z6R9 452 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 NLRP14Q86W24 1093 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 APCDD1Q8J025 514 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 PYROXD2Q8N2H3 581 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 TSTD1Q8NFU3 115 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ATL2Q8NHH9 583 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 TEKT4Q8WW24 435 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 SORCS1Q8WY21 1168 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 NELL1Q92832 810 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ALG14Q96F25 216 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 PEBP4Q96S96 227 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ACOX2Q99424 681 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 FEM1AQ9BSK4 669 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 TMEM109Q9BVC6 243 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 OSBPL8Q9BZF1 889 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 MUC3BQ9H195 1237 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 DHX35Q9H5Z1 703 aaKnown RBP9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ZDHHC4Q9NPG8 344 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ZSCAN32Q9NX65 697 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 CACNA2D2Q9NY47 1150 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 ZNF212Q9UDV6 495 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 R3HDM2Q9Y2K5 976 aaKnown RBP9.02□□□□□ -0.97
SMAD4-217ENST00000611848 STON1Q9Y6Q2 735 aa9.02□□□□□ -0.97
SMAD4-217ENST00000611848 SDK1Q7Z5N4 2213 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 SRRM3A6NNA2 597 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 WASH4PA8MWX3 477 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ZBTB24O43167 697 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 SYNCRIPO60506 623 aaKnown RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 SRPRAP08240 638 aaKnown RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 IL1R2P27930 398 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 EPHB2P29323 1055 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 NNMTP40261 264 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 CETN2P41208 172 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 HCAR3P49019 387 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 TPI1P60174 286 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 COPS2P61201 443 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ST8SIA6P61647 398 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ECT2LQ008S8 904 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 SLC25A11Q02978 314 aaKnown RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 CAV1Q03135 178 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 STARD3Q14849 445 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 PPP1R7Q15435 360 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 DPYSL2Q16555 572 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 CA9Q16790 459 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 PTPRNQ16849 979 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 FNDC3BQ53EP0 1204 aaKnown RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 DAB2IPQ5VWQ8 1189 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 RNF219Q5W0B1 726 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 DRICH1Q6PGQ1 229 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ZC3H14Q6PJT7 736 aaKnown RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 TSSK4Q6SA08 328 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 SERPINA13PQ6UXR4 307 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 LONP2Q86WA8 852 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ARFGAP2Q8N6H7 521 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 RTL3Q8N8U3 475 aaKnown RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 OR52K2Q8NGK3 314 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 CYB5D2Q8WUJ1 264 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ATG4AQ8WYN0 398 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ATOH1Q92858 354 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 TLCD1Q96CP7 247 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 RBM41Q96IZ5 413 aaKnown RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 HHIPQ96QV1 700 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 KCTD15Q96SI1 283 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 C2orf49Q9BVC5 232 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ZWILCHQ9H900 591 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 GPATCH2LQ9NWQ4 482 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 CWC15Q9P013 229 aaKnown RBP9.01□□□□□ -0.97
SMAD4-217ENST00000611848 EBF1Q9UH73 591 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 SUN2Q9UH99 717 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 VPS28Q9UK41 221 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 NEU3Q9UQ49 428 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 ERVW-1Q9UQF0 538 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 PCDHGA2Q9Y5H1 932 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 OR51B4Q9Y5P0 310 aa9.01□□□□□ -0.97
SMAD4-217ENST00000611848 GON4LQ3T8J9 2241 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 CXorf51AA0A1B0GTR3 108 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 A0A1W2PQF6 199 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 WASH3PC4AMC7 463 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 EEF2KO00418 725 aaKnown RBP9□□□□□ -0.97
SMAD4-217ENST00000611848 GAS8O95995 478 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 EPHX1P07099 455 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 TCF4P15884 667 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 WASP42768 502 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 SSR1P43307 286 aaKnown RBP9□□□□□ -0.97
SMAD4-217ENST00000611848 GNGT1P63211 74 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 GNA12Q03113 381 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 CALCOCO2Q13137 446 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 SMTNL2Q2TAL5 461 aa9□□□□□ -0.97
SMAD4-217ENST00000611848 PPP6R3Q5H9R7 873 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms