RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.59□□□□□ -0.712e-7■■■□□ 16.8
PABPC1-224ENST00000610907 TASP1Q9H6P5 420 aa10.59□□□□□ -0.71
PABPC1-224ENST00000610907 TREX1Q9NSU2 369 aa10.59□□□□□ -0.71
PABPC1-224ENST00000610907 OLA1Q9NTK5 396 aaKnown RBP10.59□□□□□ -0.71
PABPC1-224ENST00000610907 GEMIN8Q9NWZ8 242 aaKnown RBP10.59□□□□□ -0.71
PABPC1-224ENST00000610907 COMMD8Q9NX08 183 aa10.59□□□□□ -0.71
PABPC1-224ENST00000610907 CLIC5Q9NZA1 410 aa10.59□□□□□ -0.71
PABPC1-224ENST00000610907 SFMBT1Q9UHJ3 866 aa10.59□□□□□ -0.71
PABPC1-224ENST00000610907 IPO11Q9UI26 975 aaKnown RBP10.59□□□□□ -0.71
PABPC1-224ENST00000610907 ANGPTL2Q9UKU9 493 aa10.59□□□□□ -0.71
PABPC1-224ENST00000610907 HS3ST4Q9Y661 456 aa10.59□□□□□ -0.71
PABPC1-224ENST00000610907 SHROOM3Q8TF72 1996 aa10.59□□□□□ -0.71
PABPC1-224ENST00000610907 A0A087X1B8 175 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 A0A1W2PQH9 124 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 FAM92AA1XBS5 289 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 HEATR9A2RTY3 570 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 H0Y3Z8 333 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 PAPSS2O95340 614 aaPredicted RBP10.58□□□□□ -0.72
PABPC1-224ENST00000610907 MT-CYBP00156 380 aaPredicted RBP10.58□□□□□ -0.72
PABPC1-224ENST00000610907 ITGB1P05556 798 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 STMN1P16949 149 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 IBSPP21815 317 aaPredicted RBP10.58□□□□□ -0.72
PABPC1-224ENST00000610907 ARRB2P32121 409 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 CPA2P48052 419 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 PSEN1P49768 467 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 PAPOLAP51003 745 aaKnown RBP10.58□□□□□ -0.72
PABPC1-224ENST00000610907 RAB10P61026 200 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 POU4F1Q01851 419 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 PRKAA1Q13131 559 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 UBAP2LQ14157 1087 aaKnown RBP10.58□□□□□ -0.72
PABPC1-224ENST00000610907 DLG2Q15700 870 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 SLC39A12Q504Y0 691 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 AAGABQ6PD74 315 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 ARHGAP36Q6ZRI8 547 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 GALNT7Q86SF2 657 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 RNF180Q86T96 592 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 SCN4BQ8IWT1 228 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 LMNTD2Q8IXW0 634 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 COLGALT2Q8IYK4 626 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 TMEM151AQ8N4L1 468 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 ATP6V0D2Q8N8Y2 350 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 C2CD4AQ8NCU7 369 aaPredicted RBP10.58□□□□□ -0.72
PABPC1-224ENST00000610907 PPFIBP2Q8ND30 876 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 WDR60Q8WVS4 1066 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 DNAJC9Q8WXX5 260 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 ATXN7L3BQ96GX2 97 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 THTPAQ9BU02 230 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 GATA5Q9BWX5 397 aaPredicted RBP10.58□□□□□ -0.72
PABPC1-224ENST00000610907 FSD1LQ9BXM9 530 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 ZYG11BQ9C0D3 744 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 CXorf56Q9H5V9 222 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 COG4Q9H9E3 785 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 CAB39LQ9H9S4 337 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 NMUR1Q9HB89 426 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 TMEM248Q9NWD8 314 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 RUVBL2Q9Y230 463 aaKnown RBP10.58□□□□□ -0.72
PABPC1-224ENST00000610907 PCDHB5Q9Y5E4 795 aa10.58□□□□□ -0.72
PABPC1-224ENST00000610907 IGLV3-10A0A075B6K4 115 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 OR6C75A6NL08 312 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 TARM1B6A8C7 271 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 MATN2O00339 956 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 HDAC3O15379 428 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 NVLO15381 856 aaKnown RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 CCNT2O60583 730 aaKnown RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 RTN3O95197 1032 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 VAPBO95292 243 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 HLA-DQB2P05538 268 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 SLC35E2BP0CK96 405 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 GLDCP23378 1020 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 GABRB3P28472 473 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 CD151P48509 253 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 RPL14P50914 215 aaKnown RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 TBX4P57082 545 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 AP2B1P63010 937 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 IRF9Q00978 393 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 BTKQ06187 659 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 SMARCB1Q12824 385 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 LAMB3Q13751 1172 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 POU6F1Q14863 301 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 TMCO4Q5TGY1 634 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 SNX30Q5VWJ9 437 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 KDELC1Q6UW63 502 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 ATG14Q6ZNE5 492 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 ADGRG6Q86SQ4 1221 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 SETD3Q86TU7 594 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 MYLK4Q86YV6 388 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 ZNF781Q8N8C0 355 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 TDRD5Q8NAT2 981 aaKnown RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 ACTRT2Q8TDY3 377 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 IMP4Q96G21 291 aaKnown RBP10.57□□□□□ -0.72
PABPC1-224ENST00000610907 CNDP1Q96KN2 507 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 MRGPRX2Q96LB1 330 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 PGLYRP2Q96PD5 576 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 CCDC28BQ9BUN5 200 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 FTHL17Q9BXU8 183 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 TRPV6Q9H1D0 765 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 RETREG1Q9H6L5 497 aa10.57□□□□□ -0.72
PABPC1-224ENST00000610907 ATP13A1Q9HD20 1204 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms