RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 NLRP14Q86W24 1093 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 FAM72BQ86X60 149 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 PLPP6Q8IY26 295 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 PCDH20Q8N6Y1 951 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 JOSD2Q8TAC2 188 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 HNRNPLLQ8WVV9 542 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 ARHGEF2Q92974 986 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 ISG20Q96AZ6 181 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 PPP1R16AQ96I34 528 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 FEM1CQ96JP0 617 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 BMFQ96LC9 184 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 MYOCQ99972 504 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 FZD3Q9NPG1 666 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 NDFIP2Q9NV92 336 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 KLHL11Q9NVR0 708 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 HECAQ9UBI9 543 aaPredicted RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 FCF1Q9Y324 198 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 DAAM1Q9Y4D1 1078 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 FADS3Q9Y5Q0 445 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 HS3ST3A1Q9Y663 406 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 COL5A1P20908 1838 aaPredicted RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 IGF2RP11717 2491 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 DOCK4Q8N1I0 1966 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 NYNRINQ9P2P1 1898 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 NBEAQ8NFP9 2946 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 ADAMTS20P59510 1910 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 SIGLEC16A6NMB1 481 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 SIGLEC6O43699 453 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 AP1G1O43747 822 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 LRIG2O94898 1065 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 PAK4O96013 591 aaPredicted RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 ADRB3P13945 408 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 RHOQP17081 205 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 ACP1P24666 158 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 ITGB7P26010 798 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 RFC1P35251 1148 aaPredicted RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 HNF1BP35680 557 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 ETFBP38117 255 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 PTPN9P43378 593 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 MAPKAPK2P49137 400 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 CCNHP51946 323 aaPredicted RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 NEK3P51956 506 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 COPB1P53618 953 aaKnown RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 HDAC4P56524 1084 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 GSCP56915 257 aaPredicted RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 RPS21P63220 83 aaKnown RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 TARDBPQ13148 414 aaKnown RBP eCLIP7.76□□□□□ -1.173e-6■■■□□ 15.9
CUX1-219ENST00000606749 ILKQ13418 452 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 SYCP1Q15431 976 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 CLEC16AQ2KHT3 1053 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 COL28A1Q2UY09 1125 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 PROX2Q3B8N5 592 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 GCNT7Q6ZNI0 430 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 Q6ZSR6 202 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 ABI3BPQ7Z7G0 1075 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 PHF13Q86YI8 300 aaPredicted RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 CACTIN-AS1Q8N1I8 211 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 CCDC185Q8N715 623 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 OR13H1Q8NG92 308 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 FAM174AQ8TBP5 190 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 VOPP1Q96AW1 172 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 IFT43Q96FT9 208 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 C11orf70Q9BRQ4 267 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 SLC17A9Q9BYT1 436 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 MAGEH1Q9H213 219 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 CAAP1Q9H8G2 361 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 SCUBE2Q9NQ36 999 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 TMEM248Q9NWD8 314 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 UCKL1Q9NWZ5 548 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 ADAM22Q9P0K1 906 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 LIMA1Q9UHB6 759 aaKnown RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 DNAI1Q9UI46 699 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 HPCAL4Q9UM19 191 aa7.76□□□□□ -1.17
CUX1-219ENST00000606749 TP53BP1Q12888 1972 aaPredicted RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 ARID1BQ8NFD5 2236 aaPredicted RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 DSPP15924 2871 aaKnown RBP7.76□□□□□ -1.17
CUX1-219ENST00000606749 URB1O60287 2271 aaKnown RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 A0A087WV48 116 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 TCRBV5S1A1TA0A578 114 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 POM121BA6NF01 834 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 IGLON5A6NGN9 336 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 LGALS16A8MUM7 142 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 RAD51BO15315 384 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 TSPAN6O43657 245 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 KDELR3O43731 214 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 PIAS2O75928 621 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 POP4O95707 220 aaKnown RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 GIMD1P0DJR0 217 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 GKP32189 559 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 NSFP46459 744 aaKnown RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 GEMIN4P57678 1058 aaKnown RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 E2F1Q01094 437 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 UBXN1Q04323 297 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 SGCGQ13326 291 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 POLD3Q15054 466 aaPredicted RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 MYLK3Q32MK0 819 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 ZNF805Q5CZA5 627 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 HES3Q5TGS1 186 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 KIAA1161Q6NSJ0 714 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 WDR59Q6PJI9 974 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms