RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 BST2Q10589 180 aaKnown RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 IFRD2Q12894 506 aaPredicted RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 CYLC2Q14093 348 aaPredicted RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 CCDC85BQ15834 202 aaPredicted RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 GRAMD1BQ3KR37 738 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 SLC9B1Q4ZJI4 515 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 PPP6R3Q5H9R7 873 aaPredicted RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 PPP1R26Q5T8A7 1209 aaPredicted RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 EFCAB12Q6NXP0 572 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 CASC4Q6P4E1 433 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 KLC3Q6P597 504 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 PSRC1Q6PGN9 363 aaPredicted RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 TRAF7Q6Q0C0 670 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 ZNF410Q86VK4 478 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 KLHDC8BQ8IXV7 354 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 DSELQ8IZU8 1212 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 LRRC71Q8N4P6 559 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 TDRD5Q8NAT2 981 aaKnown RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 SHKBP1Q8TBC3 707 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 KBTBD7Q8WVZ9 684 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 SLC9A7Q96T83 725 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 HAUS8Q9BT25 410 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 GATA5Q9BWX5 397 aaPredicted RBP8.72□□□□□ -1.01
SIN3B-208ENST00000596638 SEZ6LQ9BYH1 1024 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 MINDY3Q9H8M7 445 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 EFCAB1Q9HAE3 211 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 NMRAL1Q9HBL8 299 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 LRRC4Q9HBW1 653 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 BFARQ9NZS9 450 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 TRHDEQ9UKU6 1024 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 LZTS1Q9Y250 596 aa8.72□□□□□ -1.01
SIN3B-208ENST00000596638 A0A096LPK6 155 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 LOC100653049A0A140TA62 436 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 CAPN8A6NHC0 703 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TRIM38O00635 465 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TXNDC9O14530 226 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 ACOT8O14734 319 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 GRID2O43424 1007 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 GALR2O43603 387 aaPredicted RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 NPHS1O60500 1241 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 NBNO60934 754 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 DAB1O75553 588 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 GRAP2O75791 330 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 KRT34O76011 436 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 AP2A1O95782 977 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TOP3BO95985 862 aaKnown RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 PPARGP37231 505 aaPredicted RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 MATKP42679 507 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 RGS7P49802 495 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 BCAT1P54687 386 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 SESN2P58004 480 aaPredicted RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TUBA4AP68366 448 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TXNL4AP83876 142 aaKnown RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 NSUN2Q08J23 767 aaKnown RBP eCLIP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TRAP1Q12931 704 aaKnown RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 ZBTB6Q15916 424 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 CNGA3Q16281 694 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TRIM71Q2Q1W2 868 aaKnown RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TBC1D25Q3MII6 688 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 DCAF4L1Q3SXM0 396 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 HSDL1Q3SXM5 330 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 SLC25A52Q3SY17 297 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 PPM1JQ5JR12 505 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TCHHL1Q5QJ38 904 aaPredicted RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 VWA5B1Q5TIE3 1220 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 LIPMQ5VYY2 423 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 SEL1L3Q68CR1 1132 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 RBM44Q6ZP01 1051 aaKnown RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 LIMS2Q7Z4I7 341 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 STRA8Q7Z7C7 330 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 SATL1Q86VE3 508 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 SNX32Q86XE0 403 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TRIM50Q86XT4 487 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 ZNF781Q8N8C0 355 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TMEM102Q8N9M5 508 aaPredicted RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 RIN3Q8TB24 985 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 URGCPQ8TCY9 931 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 ITFG2Q969R8 447 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 NT5C3BQ969T7 300 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 P2RY11Q96G91 374 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 MPP4Q96JB8 637 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 FAR2Q96K12 515 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 FCRL3Q96P31 734 aaPredicted RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 CATSPER2Q96P56 530 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 UHRF1Q96T88 793 aaPredicted RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 VAT1Q99536 393 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 TRIM56Q9BRZ2 755 aaKnown RBP8.71□□□□□ -1.02
SIN3B-208ENST00000596638 RNPEPQ9H4A4 650 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 CERS4Q9HA82 394 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 CYP4F11Q9HBI6 524 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 UBAP1Q9NZ09 502 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 SARDHQ9UL12 918 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 PSAT1Q9Y617 370 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 AP4B1Q9Y6B7 739 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 SQORQ9Y6N5 450 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 RPS6KL1Q9Y6S9 549 aa8.71□□□□□ -1.02
SIN3B-208ENST00000596638 RALGAPA2Q2PPJ7 1873 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms