RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 PADI4Q9UM07 663 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ZFR2Q9UPR6 939 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TRAF3IP3Q9Y228 551 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 HS3ST2Q9Y278 367 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 AHCTF1Q8WYP5 2266 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TLN1Q9Y490 2541 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PRAMEF33A0A0G2JMD5 474 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 RCCD1A6NED2 376 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 POM121BA6NF01 834 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 F5H5T6 163 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 STMND1H3BQB6 276 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 M0QYT0 321 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 YY2O15391 372 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 SART1O43290 800 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PRAMEF10O60809 474 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PPP6R2O75170 966 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PCDH8O95206 1070 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PAK4O96013 591 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 APOEP02649 317 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 LTFP02788 710 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 ANXA6P08133 673 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 VDRP11473 427 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PNLIPP16233 465 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 WT1P19544 449 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 CHRNA3P32297 505 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 NOS2P35228 1153 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 BLKP51451 505 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 NUCB2P80303 420 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PPP3CAQ08209 521 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 SRSF6Q13247 344 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 EIF4EBP2Q13542 120 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PDE1CQ14123 709 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 RABEP1Q15276 862 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 CLPPQ16740 277 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 SKIDA1Q1XH10 827 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 GOLGA7BQ2TAP0 167 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 ACCSLQ4AC99 568 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 RABGAP1LQ5R372 815 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 KRT39Q6A163 491 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 CXorf57Q6NSI4 855 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 CRTC1Q6UUV9 634 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 LCLAT1Q6UWP7 414 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PTAR1Q7Z6K3 402 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 B3GNT8Q7Z7M8 397 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PTRH1Q86Y79 214 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 TICAM1Q8IUC6 712 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 LGI2Q8N0V4 545 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 CCAR2Q8N163 923 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 FSTL5Q8N475 847 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 OR2A12Q8NGT7 310 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 LMX1AQ8TE12 382 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 HSFY1Q96LI6 401 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 KLF6Q99612 283 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PRMT1Q99873 361 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 MYOCQ99972 504 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 FEM1AQ9BSK4 669 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 C1QTNF2Q9BXJ5 285 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 FZD3Q9NPG1 666 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 CUEDC1Q9NWM3 386 aaPredicted RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 RAB20Q9NX57 234 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 APOBEC3BQ9UH17 382 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 APPL1Q9UKG1 709 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 NAALADL1Q9UQQ1 740 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 LOXL2Q9Y4K0 774 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 PCDHGA3Q9Y5H0 932 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 OR51B4Q9Y5P0 310 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 FBN2P35556 2912 aa6.37□□□□□ -1.39
TVP23B-210ENST00000582288 ANKRD17O75179 2603 aaKnown RBP6.37□□□□□ -1.39
TVP23B-210ENST00000582288 CXorf51AA0A1B0GTR3 108 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 A0A1W2PQM1 296 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 KCNU1A8MYU2 1149 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 C9orf172C9J069 976 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 O00370 1275 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 KPNA3O00505 521 aaPredicted RBP6.36□□□□□ -1.39
TVP23B-210ENST00000582288 SPINT1O43278 529 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 TSPAN6O43657 245 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 CALUO43852 315 aaPredicted RBP6.36□□□□□ -1.39
TVP23B-210ENST00000582288 STX10O60499 249 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 GCATO75600 419 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 IGLV3-25P01717 112 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 FYNP06241 537 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 CTSLP07711 333 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 ALPIP09923 528 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 SLC2A3P11169 496 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 KRT13P13646 458 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 LCP1P13796 627 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 PDGFRAP16234 1089 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 TACR2P21452 398 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 RPL13P26373 211 aaKnown RBP6.36□□□□□ -1.39
TVP23B-210ENST00000582288 GCLMP48507 274 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 RPL34P49207 117 aaKnown RBP6.36□□□□□ -1.39
TVP23B-210ENST00000582288 NASPP49321 788 aaPredicted RBP6.36□□□□□ -1.39
TVP23B-210ENST00000582288 ATP1A2P50993 1020 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 NEK3P51956 506 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 ADKP55263 362 aaKnown RBP6.36□□□□□ -1.39
TVP23B-210ENST00000582288 YWHAEP62258 255 aaKnown RBP6.36□□□□□ -1.39
TVP23B-210ENST00000582288 CYP4F2P78329 520 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 KRT83P78385 493 aa6.36□□□□□ -1.39
TVP23B-210ENST00000582288 KLRB1Q12918 225 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms