RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DDX42Q86XP3 938 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 DENND1CQ8IV53 801 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 REXO1L1PQ8IX06 675 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SPACA3Q8IXA5 215 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 CCDC105Q8IYK2 499 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 UBALD2Q8IYN6 164 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PYROXD2Q8N2H3 581 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC35G2Q8TBE7 412 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF564Q8TBZ8 553 aaPredicted RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 RNF139Q8WU17 664 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM172AQ8WUF8 416 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 CLDN23Q96B33 292 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 FAF2Q96CS3 445 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 BTN2A3PQ96KV6 586 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 C1orf74Q96LT6 269 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 CCDC42Q96M95 316 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 HERPUD2Q9BSE4 406 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SNRNP25Q9BV90 132 aaKnown RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 TRIM62Q9BVG3 475 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SELENOOQ9BVL4 669 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 TRMT61BQ9BVS5 477 aaKnown RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 NUP85Q9BW27 656 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 TRPM6Q9BX84 2022 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 BHLHE41Q9C0J9 482 aaPredicted RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 OSBPL2Q9H1P3 480 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PDCL3Q9H2J4 239 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 GOLPH3Q9H4A6 298 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SLITRK6Q9H5Y7 841 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 ECT2Q9H8V3 914 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM204AQ9H8W3 233 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SPHK2Q9NRA0 654 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 HEBP1Q9NRV9 189 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SEPT11Q9NVA2 429 aaKnown RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PARVAQ9NVD7 372 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 C2orf42Q9NWW7 574 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 DUS2Q9NX74 493 aaKnown RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 UVRAGQ9P2Y5 699 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 WNT16Q9UBV4 365 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 FZD10Q9ULW2 581 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 STAP1Q9ULZ2 295 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC27A6Q9Y2P4 619 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 MTF2Q9Y483 593 aaPredicted RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 CAPN6Q9Y6Q1 641 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SCINQ9Y6U3 715 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 OTOGLQ3ZCN5 2332 aa3.9□□□□□ -1.78
SMARCE1-215ENST00000578995 PIKFYVEQ9Y2I7 2098 aa3.9□□□□□ -1.78
SMARCE1-215ENST00000578995 USP27XA6NNY8 438 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 WASH4PA8MWX3 477 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PRRT4C9JH25 899 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 K7EQS6 105 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 DCLK1O15075 740 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ARHGAP6O43182 974 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PI15O43692 258 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 AKR1B10O60218 316 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TULP3O75386 442 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ZMPSTE24O75844 475 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CNTN5O94779 1100 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 LRIG2O94898 1065 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CD160O95971 181 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 F9P00740 461 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 RPLP1P05386 114 aaKnown RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CD48P09326 243 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CHRNB1P11230 501 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TYRP14679 529 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 HNRNPLP14866 589 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CD72P21854 359 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PSMA2P25787 234 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 HLA-FP30511 346 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 SDC4P31431 198 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 L1CAMP32004 1257 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CCR1P32246 355 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CD70P32970 193 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CYLC1P35663 651 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 EIF2DP41214 584 aaKnown RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MAGEA1P43355 309 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 IFNAR2P48551 515 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PEX5P50542 639 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 KPNA1P52294 538 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PLK1P53350 603 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 SNX16P57768 344 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 RNASE9P60153 205 aaKnown RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 DEUP1Q05D60 604 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ADCY2Q08462 1091 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 NME3Q13232 169 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 AUHQ13825 339 aaKnown RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 DPYSQ14117 519 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ACAP1Q15027 740 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MLF2Q15773 248 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CDO1Q16878 200 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 GEN1Q17RS7 908 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ITPRIPL2Q3MIP1 535 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ATP13A4Q4VNC1 1196 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC44A4Q53GD3 710 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 C2orf27AQ580R0 203 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 C10orf76Q5T2E6 689 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MPP7Q5T2T1 576 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 DCAF12L1Q5VU92 463 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 C11orf63Q6NUN7 778 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 FBXL22Q6P050 247 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms