RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PRRT3Q5FWE3 981 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 RAB11FIP2Q7L804 512 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 OR2A12Q8NGT7 310 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 SCG3Q8WXD2 468 aaKnown RBP12.19□□□□□ -0.46
CTNS-208ENST00000574218 ALG14Q96F25 216 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 SLC13A1Q9BZW2 595 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 METTL14Q9HCE5 456 aaKnown RBP12.19□□□□□ -0.46
CTNS-208ENST00000574218 RMND1Q9NWS8 449 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 HPSEQ9Y251 543 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 PCDHB11Q9Y5F2 797 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 PCDHGA7Q9Y5G6 932 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 BOD1L1Q8NFC6 3051 aa12.19□□□□□ -0.46
CTNS-208ENST00000574218 PMS2P1A4D2B8 440 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 E5RJQ4 531 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 SUV39H1O43463 412 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 LEFTY1O75610 366 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 ADCY5O95622 1261 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 CALCAP01258 141 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 FAM87AP0C7U9 286 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 LIPCP11150 499 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 ADRB3P13945 408 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 ITGB7P26010 798 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 GPD2P43304 727 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 DNA2P51530 1060 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 ADKP55263 362 aaKnown RBP12.18□□□□□ -0.46
CTNS-208ENST00000574218 FAXCQ5TGI0 409 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 C22orf39Q6P5X5 142 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 SLC35F3Q8IY50 421 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
CTNS-208ENST00000574218 CHST14Q8NCH0 376 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 DENND6BQ8NEG7 585 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 STK32AQ8WU08 396 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 SLC35C1Q96A29 364 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 TMEM74Q96NL1 305 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 GFM1Q96RP9 751 aaKnown RBP12.18□□□□□ -0.46
CTNS-208ENST00000574218 ZSWIM1Q9BR11 485 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 BOCQ9BWV1 1114 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 SIK2Q9H0K1 926 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 TNKS2Q9H2K2 1166 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 GPR27Q9NS67 375 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 ANKMY1Q9P2S6 941 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 GULP1Q9UBP9 304 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 PADI4Q9UM07 663 aa12.18□□□□□ -0.46
CTNS-208ENST00000574218 LMO7DNF2Z398 122 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 AP1G1O43747 822 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 SNAP91O60641 907 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 ENDOD1O94919 500 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 MT-CO1P00395 513 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 GLI1P08151 1106 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 L1CAMP32004 1257 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 UGT1A5P35504 534 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 GGCXP38435 758 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 RPL34P49207 117 aaKnown RBP12.17□□□□□ -0.46
CTNS-208ENST00000574218 NDUFA8P51970 172 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 PITX1P78337 314 aaPredicted RBP12.17□□□□□ -0.46
CTNS-208ENST00000574218 NME3Q13232 169 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 C1orf61Q13536 156 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 CCDC40Q4G0X9 1142 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 EFHC1Q5JVL4 640 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 RETSATQ6NUM9 610 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 DENND1BQ6P3S1 775 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 LRRC31Q6UY01 552 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 RRAGAQ7L523 313 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 PHACTR4Q8IZ21 702 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 RBFAQ8N0V3 343 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 DEFB106AQ8N104 65 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 DCAF4L2Q8NA75 395 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 OR52K2Q8NGK3 314 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 KAT5Q92993 513 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 LENG8Q96PV6 779 aaPredicted RBP12.17□□□□□ -0.46
CTNS-208ENST00000574218 SEMA3CQ99985 751 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 HEPHQ9BQS7 1158 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 C1QTNF7Q9BXJ2 289 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 SLC4A5Q9BY07 1137 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 PISDQ9UG56 409 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 TBC1D30Q9Y2I9 924 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 OR51B4Q9Y5P0 310 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 FADS3Q9Y5Q0 445 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 HS3ST4Q9Y661 456 aa12.17□□□□□ -0.46
CTNS-208ENST00000574218 COL12A1Q99715 3063 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 FLNCQ14315 2725 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 K7ERQ8 282 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 RAD51BO15315 384 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 THAP12O43422 761 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 SMAD6O43541 496 aaKnown RBP12.16□□□□□ -0.46
CTNS-208ENST00000574218 TSPAN6O43657 245 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 HSF2BPO75031 334 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
CTNS-208ENST00000574218 CTSEP14091 401 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 BLKP51451 505 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 IRAK1P51617 712 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 SNX16P57768 344 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 KRT85P78386 507 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 GCNT1Q02742 428 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 TLE1Q04724 770 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 EIF2B5Q13144 721 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms