RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PTTG2Q9NZH5 202 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 XPR1Q9UBH6 696 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 POLR2AP24928 1970 aaKnown RBP15.87■□□□□ 0.13
NUP88-207ENST00000573584 ZNF638Q14966 1978 aaKnown RBP15.86■□□□□ 0.13
NUP88-207ENST00000573584 PRSS51A0A1B0GVH4 220 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 TARM1B6A8C7 271 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 ACOT8O14734 319 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 PTPN1P18031 435 aaKnown RBP15.86■□□□□ 0.13
NUP88-207ENST00000573584 LILRA4P59901 499 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 ZNF460Q14592 562 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 LRRC23Q53EV4 343 aaPredicted RBP15.86■□□□□ 0.13
NUP88-207ENST00000573584 NAPEPLDQ6IQ20 393 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 LRRC8EQ6NSJ5 796 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 LIMS2Q7Z4I7 341 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 CNTD1Q8N815 330 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 FAM156AQ8NDB6 213 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 TEKT5Q96M29 485 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 OMDQ99983 421 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 ULBP1Q9BZM6 244 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 FBXW11Q9UKB1 542 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.86■□□□□ 0.13
NUP88-207ENST00000573584 TCAF2A6NFQ2 919 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 YJEFN3A6XGL0 299 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 TMEM233B4DJY2 109 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 GPR32O75388 356 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 FAM58BPP0C7Q3 252 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 HCAR3P49019 387 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 CDKL1Q00532 357 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 GALNT2Q10471 571 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 SCAPQ12770 1279 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 PRPSAP1Q14558 356 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 RFTN1Q14699 578 aaPredicted RBP15.86■□□□□ 0.13
NUP88-207ENST00000573584 KLHDC10Q6PID8 442 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 LCA5Q86VQ0 697 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 RNF217Q8TC41 542 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 EMID1Q96A84 441 aaPredicted RBP15.86■□□□□ 0.13
NUP88-207ENST00000573584 VAT1Q99536 393 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 KIFC1Q9BW19 673 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 UNKQ9C0B0 810 aaKnown RBP15.86■□□□□ 0.13
NUP88-207ENST00000573584 ZNF696Q9H7X3 374 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 PLK2Q9NYY3 685 aa15.86■□□□□ 0.13
NUP88-207ENST00000573584 MYOCOSA0A1B0GUC4 107 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 ASLP04424 464 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 COL6A2P12110 1019 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 NCAM1P13591 858 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 HSPA13P48723 471 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 PTK2BQ14289 1009 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 INTS6LQ5JSJ4 861 aaKnown RBP15.85■□□□□ 0.13
NUP88-207ENST00000573584 B3GNT6Q6ZMB0 384 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 MOB2Q70IA6 237 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 OTOP3Q7RTS5 596 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 KDM1BQ8NB78 822 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 PPP1R13LQ8WUF5 828 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 STON2Q8WXE9 905 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 NXNL1Q96CM4 212 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 VTA1Q9NP79 307 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 DDIT4Q9NX09 232 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 ADA2Q9NZK5 511 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 ATXN10Q9UBB4 475 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 SNX10Q9Y5X0 201 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 NRCAMQ92823 1304 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 XPOTO43592 962 aaKnown RBP15.85■□□□□ 0.13
NUP88-207ENST00000573584 STRNO43815 780 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 VAPBO95292 243 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 WARSP23381 471 aaKnown RBP15.85■□□□□ 0.13
NUP88-207ENST00000573584 CTBP1Q13363 440 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 DENND6AQ8IWF6 608 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 ZFP28Q8NHY6 868 aa15.85■□□□□ 0.13
NUP88-207ENST00000573584 SUDS3Q9H7L9 328 aaPredicted RBP15.85■□□□□ 0.13
NUP88-207ENST00000573584 PIN4Q9Y237 131 aaKnown RBP15.85■□□□□ 0.13
NUP88-207ENST00000573584 AP3B1O00203 1094 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 RNASEH2AO75792 299 aaKnown RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 RAB10P61026 200 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 UGP2Q16851 508 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 ARL13BQ3SXY8 428 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 CEP97Q8IW35 865 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 GPC2Q8N158 579 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 DRAXINQ8NBI3 349 aaPredicted RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 ZSCAN18Q8TBC5 510 aaPredicted RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 CELF6Q96J87 481 aaKnown RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 MRPL1Q9BYD6 325 aaKnown RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 EPS15L1Q9UBC2 864 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 OR12D3Q9UGF7 316 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 BPTFQ12830 3046 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 CAPN15O75808 1086 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 CAPNS1P04632 268 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 FAM200BP0CF97 657 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 STMN1P16949 149 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 YBX3P16989 372 aaKnown RBP eCLIP15.84■□□□□ 0.13
NUP88-207ENST00000573584 MPP1Q00013 466 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 MYLK3Q32MK0 819 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 SH2D4BQ5SQS7 431 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 LINC00523Q86TU6 105 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 TOP6BLQ8N6T0 577 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 TMEM102Q8N9M5 508 aaPredicted RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 CEP70Q8NHQ1 597 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 USP33Q8TEY7 942 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 GPR78Q96P69 363 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 NCKIPSDQ9NZQ3 722 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms