RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 RPL34P49207 117 aaKnown RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 PHEXP78562 749 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 STX5Q13190 355 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 OLIG2Q13516 323 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 SPIDRQ14159 915 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 SOWAHAQ2M3V2 549 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 HSDL1Q3SXM5 330 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 SLC44A4Q53GD3 710 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 GLRA4Q5JXX5 417 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 ANKRD23Q86SG2 305 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 KCNMB4Q86W47 210 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 PCDH20Q8N6Y1 951 aaKnown RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 ZNF668Q96K58 619 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 FTHL17Q9BXU8 183 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 HIPK3Q9H422 1215 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 MRGBPQ9NV56 204 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 CNOT6Q9ULM6 557 aaKnown RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 MAGEB16A2A368 324 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 NPHS1O60500 1241 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 ZNF189O75820 626 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 GJB1P08034 283 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 PDGFRBP09619 1106 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 COL6A2P12110 1019 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 BMP2P12643 396 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 IDO1P14902 403 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 CDH15P55291 814 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 ESRRGP62508 458 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 CTBSQ01459 385 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 GRM3Q14832 879 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 C16orf72Q14CZ0 275 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 PAFAH1B3Q15102 231 aaKnown RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 MAPRE2Q15555 327 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 FAM187BQ17R55 369 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 METTL7BQ6UX53 244 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 ACOT1Q86TX2 421 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 CLVS1Q8IUQ0 354 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 RNF168Q8IYW5 571 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 PACRGLQ8N7B6 248 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 MFSD2AQ8NA29 543 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 ANKRD52Q8NB46 1076 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 ZNF280CQ8ND82 737 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 HMGCLL1Q8TB92 370 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 CLEC4CQ8WTT0 213 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 C12orf43Q96C57 262 aaKnown RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 TSNARE1Q96NA8 513 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 NFKBIZQ9BYH8 718 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 PRDM12Q9H4Q4 367 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 LRRC4Q9HBW1 653 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 FAM49BQ9NUQ9 324 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 PRMT7Q9NVM4 692 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 DPP3Q9NY33 737 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 SEPT10Q9P0V9 454 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 EBF1Q9UH73 591 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 TLK1Q9UKI8 766 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 TDRKHQ9Y2W6 561 aaKnown RBP15.89■□□□□ 0.13
COMMD4-215ENST00000566843 SNX13Q9Y5W8 968 aa15.89■□□□□ 0.13
COMMD4-215ENST00000566843 DLX3O60479 287 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 PORP16435 677 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 FGFR3P22607 806 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 EDNRBP24530 442 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 PFKPQ01813 784 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 NBPF12Q5TAG4 269 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 ARHGAP17Q68EM7 881 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 KCTD11Q693B1 232 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 DLK2Q6UY11 383 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 CATSPERGQ6ZRH7 1159 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 PID1Q7Z2X4 250 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 TRIM50Q86XT4 487 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 GIPC3Q8TF64 312 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 DOK1Q99704 481 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 CIB1Q99828 191 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 EFHD1Q9BUP0 239 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 AS3MTQ9HBK9 375 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 CACNA2D2Q9NY47 1150 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 SLC39A10Q9ULF5 831 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 FZD1Q9UP38 647 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 RUVBL2Q9Y230 463 aaKnown RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 NME7Q9Y5B8 376 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 FBP2O00757 339 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 HMOX2P30519 316 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 NPY2RP49146 381 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 PRKCQQ04759 706 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 REP15Q6BDI9 236 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 ITPRIPL1Q6GPH6 555 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 C8orf82Q6P1X6 216 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 ZBTB49Q6ZSB9 765 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 PTAR1Q7Z6K3 402 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 ZC3HC1Q86WB0 502 aaKnown RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 FAM47BQ8NA70 645 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 CHST13Q8NET6 341 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 PBXIP1Q96AQ6 731 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 MFSD3Q96ES6 412 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 MRPL45Q9BRJ2 306 aaKnown RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 NOL11Q9H8H0 719 aaKnown RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 IARS2Q9NSE4 1012 aaKnown RBP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 ARMC1Q9NVT9 282 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 NSMCE4AQ9NXX6 385 aa15.88■□□□□ 0.13
COMMD4-215ENST00000566843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.88■□□□□ 0.13
COMMD4-215ENST00000566843 PRORSD1PA6NEY8 169 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 AKAP10O43572 662 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms