RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ALPPL2P10696 532 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 UROSP10746 265 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SLC2A4P14672 509 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 GABRB1P18505 474 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CCNA2P20248 432 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KELP23276 732 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MYF6P23409 242 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 GPTP24298 496 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PTPN3P26045 913 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PON1P27169 355 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PBLDP30039 288 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 CD6P30203 668 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ADSSP30520 456 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 HOXC8P31273 242 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 UQCRC1P31930 480 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 HSPA1LP34931 641 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 BMPR1AP36894 532 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PBX1P40424 430 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 GABRB2P47870 512 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 FASLGP48023 281 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MAPKAPK2P49137 400 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 HNMTP50135 292 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ARSEP51690 589 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ZNF75DP51815 510 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ATXN3P54252 364 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 PMS2P54278 862 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 F2RL1P55085 397 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CASP9P55211 416 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ITGA1P56199 1179 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TAS2R50P59544 299 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KIAA1024LP59773 190 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 RPL15P61313 204 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 ST8SIA6P61647 398 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ASIC1P78348 528 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KCNJ10P78508 379 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MRPS5P82675 430 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 TXNL4AP83876 142 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 GALK2Q01415 458 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TLE3Q04726 772 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 DDR1Q08345 913 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ABHD18Q0P651 414 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KIF5AQ12840 1032 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 RIPK1Q13546 671 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TSTA3Q13630 321 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 TUBB2AQ13885 445 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 COL9A3Q14050 684 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 IL11RAQ14626 422 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KIR3DS1Q14943 382 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 RRS1Q15050 365 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 PCOLCEQ15113 449 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PPP1R7Q15435 360 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ZRSR1Q15695 479 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 CPSF6Q16630 551 aaKnown RBP eCLIP2.1□□□□□ -2.07
RTF1-207ENST00000561076 HIST2H2ACQ16777 129 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 MEP1BQ16820 701 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 HYAL4Q2M3T9 481 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 AP5B1Q2VPB7 878 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PTCHD3Q3KNS1 767 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 GXYLT1Q4G148 440 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 FILIP1LQ4L180 1135 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 USP39Q53GS9 565 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 BOLA3Q53S33 107 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 TTC39AQ5SRH9 613 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 LCE2DQ5TA82 110 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 C12orf60Q5U649 245 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ERICH6BQ5W0A0 696 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SLC9A4Q6AI14 798 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KIAA0930Q6ICG6 404 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 C16orf87Q6PH81 154 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 IL20RBQ6UXL0 311 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 GLDNQ6ZMI3 551 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 Q6ZS46 218 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 DENND5BQ6ZUT9 1274 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 DET1Q7L5Y6 550 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ZNF551Q7Z340 670 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 HAUS6Q7Z4H7 955 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SPATA19Q7Z5L4 167 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PRRT2Q7Z6L0 340 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 GLRX5Q86SX6 157 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ARID3BQ8IVW6 561 aaPredicted RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 CFAP206Q8IYR0 622 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CMTM4Q8IZR5 234 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 VPS52Q8N1B4 723 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 BATF2Q8N1L9 274 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CFAP52Q8N1V2 620 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ANKRD35Q8N283 1001 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 KDM8Q8N371 416 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CPXM2Q8N436 756 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SIRT6Q8N6T7 355 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 GPR161Q8N6U8 529 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 TTLL6Q8N841 843 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 MB21D1Q8N884 522 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 PI4KAP1Q8N8J0 262 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 ENDOVQ8N8Q3 282 aaKnown RBP2.1□□□□□ -2.07
RTF1-207ENST00000561076 IL17RCQ8NAC3 791 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 NHLRC2Q8NBF2 726 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 SLC4A11Q8NBS3 891 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 LEMD2Q8NC56 503 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 BBOF1Q8ND07 529 aa2.1□□□□□ -2.07
RTF1-207ENST00000561076 CNNM3Q8NE01 707 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms