RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 FBXL19Q6PCT2 694 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 GJB7Q6PEY0 223 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 FOXR2Q6PJQ5 311 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 C14orf80Q86SX3 495 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 ELOA2Q8IYF1 753 aaPredicted RBP5.97□□□□□ -1.45
USP3-215ENST00000559771 ZNF683Q8IZ20 524 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 CCAR2Q8N163 923 aaKnown RBP5.97□□□□□ -1.45
USP3-215ENST00000559771 GALNT15Q8N3T1 639 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 STK32AQ8WU08 396 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 ZNF606Q8WXB4 792 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 SMARCE1Q969G3 411 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 TRIM44Q96DX7 344 aaPredicted RBP5.97□□□□□ -1.45
USP3-215ENST00000559771 LRIG1Q96JA1 1093 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 BTN2A3PQ96KV6 586 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 SERPINB11Q96P15 392 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 SLC2A13Q96QE2 648 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 CPXM1Q96SM3 734 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 ACE2Q9BYF1 805 aaPredicted RBP5.97□□□□□ -1.45
USP3-215ENST00000559771 INTS2Q9H0H0 1204 aaKnown RBP5.97□□□□□ -1.45
USP3-215ENST00000559771 ST7Q9NRC1 585 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 FTSJ1Q9UET6 329 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 PPM1HQ9ULR3 514 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 CA5BQ9Y2D0 317 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 PCDHGA1Q9Y5H4 931 aa5.97□□□□□ -1.45
USP3-215ENST00000559771 MGAQ8IWI9 3026 aa5.96□□□□□ -1.45
USP3-215ENST00000559771 ACACAQ13085 2346 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 LRRC72A6NJI9 287 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 TLR4O00206 839 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 TRIM38O00635 465 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 ENC1O14682 589 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 PSMA7O14818 248 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 PLRG1O43660 514 aaKnown RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 ATP9BO43861 1147 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 DFNA5O60443 496 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 C1QL1O75973 258 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 SMC2O95347 1197 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 MT-CO1P00395 513 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 IL1BP01584 269 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 CTSLP07711 333 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 GIMD1P0DJR0 217 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 TFE3P19532 575 aaPredicted RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 ITPKBP27987 946 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 RXRGP48443 463 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 STX17P56962 302 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 C21orf59P57076 290 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 ST8SIA6P61647 398 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 YWHAZP63104 245 aaKnown RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 CNTN1Q12860 1018 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 TARDBPQ13148 414 aaKnown RBP eCLIP5.96□□□□□ -1.46
USP3-215ENST00000559771 PDCLQ13371 301 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 ELAVL3Q14576 367 aaKnown RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 MEA1Q16626 185 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 C5orf22Q49AR2 442 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 CCDC40Q4G0X9 1142 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 CCDC157Q569K6 752 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 AGBL4Q5VU57 503 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 CAVIN1Q6NZI2 390 aaKnown RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 FBXL22Q6P050 247 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 SND1Q7KZF4 910 aaKnown RBP eCLIP5.96□□□□□ -1.46
USP3-215ENST00000559771 ADAT2Q7Z6V5 191 aaKnown RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 TMPRSS12Q86WS5 348 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 CHSY1Q86X52 802 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 IRF2BP1Q8IU81 584 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 DEFB106AQ8N104 65 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 SLC25A45Q8N413 288 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 EID2Q8N6I1 236 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 ZNF557Q8N988 423 aaPredicted RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 OR14C36Q8NHC7 312 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 GPT2Q8TD30 523 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 GANCQ8TET4 914 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 NELFBQ8WX92 580 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 VOPP1Q96AW1 172 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 FAM149B1Q96BN6 582 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 SERAC1Q96JX3 654 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 CNDP2Q96KP4 475 aaKnown RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 PSMB7Q99436 277 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 OMDQ99983 421 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 DDX50Q9BQ39 737 aaKnown RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 FEM1AQ9BSK4 669 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 ERVMER34-1Q9H9K5 563 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 POPDC2Q9HBU9 364 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 PRM3Q9NNZ6 103 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 STOML1Q9UBI4 398 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 CTNND2Q9UQB3 1225 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 NCKAP1Q9Y2A7 1128 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 RAI2Q9Y5P3 530 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 TENM4Q6N022 2769 aa5.96□□□□□ -1.46
USP3-215ENST00000559771 URB1O60287 2271 aaKnown RBP5.96□□□□□ -1.46
USP3-215ENST00000559771 GOLGA4Q13439 2230 aaKnown RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 DOCK4Q8N1I0 1966 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SHROOM3Q8TF72 1996 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3DA0A087WVF3 549 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3IA0A087WXS9 549 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3EA0A087X179 549 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3KA0A087X1G2 549 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 LY6G6EA0A0G2JKS1 128 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 A0A1B0GVM2 712 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3FA6NER0 549 aaPredicted RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 TCAF2A6NFQ2 919 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms