RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 IL17RCQ8NAC3 791 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 WFIKKN2Q8TEU8 576 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 PGM2Q96G03 612 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 CELF6Q96J87 481 aaKnown RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 LMLNQ96KR4 655 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 FEM1AQ9BSK4 669 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 TRIM31Q9BZY9 425 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 STMN4Q9H169 189 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 MTG2Q9H4K7 406 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 CATSPERBQ9H7T0 1116 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 PCDH18Q9HCL0 1135 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 PPARGC1AQ9UBK2 798 aaKnown RBP10.07□□□□□ -0.8
PSEN1-213ENST00000555386 RSPH14Q9UHP6 348 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 PLA2G4CQ9UP65 541 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 SLC8A2Q9UPR5 921 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 NEU3Q9UQ49 428 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 ATP8A1Q9Y2Q0 1164 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 SNX24Q9Y343 169 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 USP34Q70CQ2 3546 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 GON4LQ3T8J9 2241 aa10.07□□□□□ -0.8
PSEN1-213ENST00000555386 NYNRINQ9P2P1 1898 aaKnown RBP10.06□□□□□ -0.8
PSEN1-213ENST00000555386 LRRD1A4D1F6 860 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 DFFAO00273 331 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 GAS8O95995 478 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ATP5BP06576 529 aaKnown RBP10.06□□□□□ -0.8
PSEN1-213ENST00000555386 KRT7P08729 469 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 HOXB2P14652 356 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ERCC2P18074 760 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ITIH2P19823 946 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 IL12RB1P42701 662 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 CXCL12P48061 93 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ATP1A2P50993 1020 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ST8SIA6P61647 398 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 PPP2R2AP63151 447 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 MRPS21P82921 87 aaKnown RBP10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ECT2LQ008S8 904 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 NRG1Q02297 640 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-213ENST00000555386 GNA12Q03113 381 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ADCY2Q08462 1091 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 SEMA3BQ13214 749 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 PTK6Q13882 451 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 DMC1Q14565 340 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 KRT71Q3SY84 523 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 C5orf22Q49AR2 442 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ACCSLQ4AC99 568 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 TRMT10CQ7L0Y3 403 aaKnown RBP10.06□□□□□ -0.8
PSEN1-213ENST00000555386 NLRP14Q86W24 1093 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 C1orf210Q8IVY1 113 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 PGBD3Q8N328 593 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 SYNPOQ8N3V7 929 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 SPEM1Q8N4L4 309 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 RTL3Q8N8U3 475 aaKnown RBP10.06□□□□□ -0.8
PSEN1-213ENST00000555386 BBOF1Q8ND07 529 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 EXD1Q8NHP7 514 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 FBXO25Q8TCJ0 367 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 TEKT4Q8WW24 435 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 RAPGEF5Q92565 580 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 TLCD1Q96CP7 247 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ATP13A1Q9HD20 1204 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ETNK2Q9NVF9 386 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 TMEM248Q9NWD8 314 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 TBC1D30Q9Y2I9 924 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 ACTL7AQ9Y615 435 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 STON1Q9Y6Q2 735 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 CHD5Q8TDI0 1954 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 CACNA1HO95180 2353 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 MYO15AQ9UKN7 3530 aa10.06□□□□□ -0.8
PSEN1-213ENST00000555386 MUC6Q6W4X9 2439 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 A0A0A0MRY4 1105 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 MYO1CO00159 1063 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 NDUFAB1O14561 156 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 RAMP2O60895 175 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ADAM23O75077 832 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ATG13O75143 517 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 MAP3K6O95382 1288 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 EPHX1P07099 455 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 DLDP09622 509 aaKnown RBP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 HNRNPLP14866 589 aaKnown RBP eCLIP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 PRKCHP24723 683 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 NTSR1P30989 418 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 MAPKAPK2P49137 400 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 CCR3P51677 355 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 OXCT1P55809 520 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 CORO7P57737 925 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 DPYSL3Q14195 570 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 POLD3Q15054 466 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ANGPT1Q15389 498 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 PPP1R7Q15435 360 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 DPYSL2Q16555 572 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 CCNG2Q16589 344 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 EOGTQ5NDL2 527 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 LRRC38Q5VT99 294 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 KAZNQ674X7 775 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 RNF43Q68DV7 783 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 ANO7Q6IWH7 933 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 FOXR1Q6PIV2 292 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 TMEM92Q6UXU6 159 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 CEP128Q6ZU80 1094 aa10.05□□□□□ -0.8
PSEN1-213ENST00000555386 MICALCLQ6ZW33 695 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms