RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 PRAMEF26H0Y7S4 382 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 YKT6O15498 198 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 FGF10O15520 208 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 PCDHGA12O60330 932 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CBFA2T3O75081 653 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 RNF8O76064 485 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CD160O95971 181 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 FTLP02792 175 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 WNT1P04628 370 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 MYBL1P10243 752 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 PSMA2P25787 234 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 EPHB2P29323 1055 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 GRK6P43250 576 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CCT8P50990 548 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 DNA2P51530 1060 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 METAP1P53582 386 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 SNRPD1P62314 119 aaKnown RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 PPP2CBP62714 309 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 PPP2CAP67775 309 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 FAM193AP78312 1265 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 OVGP1Q12889 678 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 STAT4Q14765 748 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 PIP5KL1Q5T9C9 394 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 SARM1Q6SZW1 724 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 ERN2Q76MJ5 926 aaKnown RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 ZSCAN30Q86W11 494 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 PYROXD2Q8N2H3 581 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 OXR1Q8N573 874 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 RTL3Q8N8U3 475 aaKnown RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CHST14Q8NCH0 376 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 RHBDD1Q8TEB9 315 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 FNIP1Q8TF40 1166 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CPLX3Q8WVH0 158 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CASKIN2Q8WXE0 1202 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 ARRDC3Q96B67 414 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 TRIM11Q96F44 468 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CAMK1GQ96NX5 476 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 ELF4Q99607 663 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 MRPL47Q9HD33 250 aaKnown RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 GDF3Q9NR23 364 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 HECAQ9UBI9 543 aaPredicted RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 WASF3Q9UPY6 502 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 NEU3Q9UQ49 428 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 APOBEC2Q9Y235 224 aaKnown RBP8.89□□□□□ -0.99
ACTN1-213ENST00000554508 SCINQ9Y6U3 715 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 WASF2Q9Y6W5 498 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CACNA1BQ00975 2339 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 ANKRD36A6QL64 1941 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 CHD8Q9HCK8 2581 aa8.89□□□□□ -0.99
ACTN1-213ENST00000554508 A0A1B0GTQ1 180 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 H0Y8X5 98 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 TLR4O00206 839 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 DDX3XO00571 662 aaKnown RBP eCLIP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 KCNK3O14649 394 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 BUB1O43683 1085 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 CREB3O43889 395 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 LEFTY1O75610 366 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 PCDH8O95206 1070 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 POP4O95707 220 aaKnown RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 GSRP00390 522 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 SKILP12757 684 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ITGB7P26010 798 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 MAT2AP31153 395 aaKnown RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 PBX1P40424 430 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 RXRGP48443 463 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 CCNHP51946 323 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 NEK3P51956 506 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ZNF135P52742 658 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 TAS2R38P59533 333 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ZBED6P86452 979 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 OGDHQ02218 1023 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 RAD51Q06609 339 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ACAP1Q15027 740 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 INAVAQ3KP66 663 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 POM121L1PQ3SYA9 428 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 PARP15Q460N3 678 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 INO80DQ53TQ3 878 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 KCNT1Q5JUK3 1230 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ERMARDQ5T6L9 678 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 E4F1Q66K89 784 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 FBXL19Q6PCT2 694 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 VPS36Q86VN1 386 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 HORMAD1Q86X24 394 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ZNF354CQ86Y25 554 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 PSTKQ8IV42 348 aaKnown RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 UMODL1-AS1Q8N2C9 162 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 OR2AP1Q8NGE2 309 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 BAHD1Q8TBE0 780 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 FAM174AQ8TBP5 190 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 GRIN3AQ8TCU5 1115 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ADAMTS14Q8WXS8 1223 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 SCNM1Q9BWG6 230 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ISCUQ9H1K1 167 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 ERVMER34-1Q9H9K5 563 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 CNOT8Q9UFF9 292 aaKnown RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 CAPN11Q9UMQ6 739 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 AP4E1Q9UPM8 1137 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 FCF1Q9Y324 198 aaKnown RBP8.88□□□□□ -0.99
ACTN1-213ENST00000554508 NEUROG3Q9Y4Z2 214 aa8.88□□□□□ -0.99
ACTN1-213ENST00000554508 COL5A1P20908 1838 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms