RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 JUPP14923 745 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 ZNF18P17022 549 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 CKMT2P17540 419 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 PON1P27169 355 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 MAT2AP31153 395 aaKnown RBP7.81□□□□□ -1.16
NEK3-201ENST00000550331 KRT9P35527 623 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 EIF2S3P41091 472 aaKnown RBP7.81□□□□□ -1.16
NEK3-201ENST00000550331 NUMBP49757 651 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 IRAK1P51617 712 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 KRT83P78385 493 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 SLC6A3Q01959 620 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 SEMG2Q02383 582 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 CFHR1Q03591 330 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 CCDC15Q0P6D6 951 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 CNTN1Q12860 1018 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 NME3Q13232 169 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 DLG2Q15700 870 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 PTPN20Q4JDL3 420 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 BRMS1LQ5PSV4 323 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 HES3Q5TGS1 186 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 OTUD1Q5VV17 481 aaPredicted RBP7.81□□□□□ -1.16
NEK3-201ENST00000550331 DESI1Q6ICB0 168 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 OR6B2Q6IFH4 312 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 FBXL19Q6PCT2 694 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 PASD1Q8IV76 773 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 CACTIN-AS1Q8N1I8 211 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 TMEM145Q8NBT3 493 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 C1orf131Q8NDD1 294 aaKnown RBP7.81□□□□□ -1.16
NEK3-201ENST00000550331 OR52K2Q8NGK3 314 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 RFFLQ8WZ73 363 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 NT5C3BQ969T7 300 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 PGAP3Q96FM1 320 aaPredicted RBP7.81□□□□□ -1.16
NEK3-201ENST00000550331 NPY6RQ99463 290 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 C2orf49Q9BVC5 232 aaPredicted RBP7.81□□□□□ -1.16
NEK3-201ENST00000550331 NRSN2Q9GZP1 204 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 MUC3BQ9H195 1237 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 SYNCQ9H7C4 482 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 STAP1Q9ULZ2 295 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 PAXBP1Q9Y5B6 917 aa7.81□□□□□ -1.16
NEK3-201ENST00000550331 ATMQ13315 3056 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 TEX51A0A1B0GUA7 166 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 DRGXA6NNA5 263 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 CBX4O00257 560 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 GADD45BO75293 160 aaPredicted RBP7.8□□□□□ -1.16
NEK3-201ENST00000550331 F9P00740 461 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 PRNPP04156 253 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 SRCP12931 536 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 ACP1P24666 158 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 CHRNA3P32297 505 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 CDH5P33151 784 aaPredicted RBP7.8□□□□□ -1.16
NEK3-201ENST00000550331 CLCN1P35523 988 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 SCNN1AP37088 669 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 CXCR3P49682 368 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 TAS2R38P59533 333 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 BPIFB4P59827 614 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 APBA1Q02410 837 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 BNIP3Q12983 259 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 TARDBPQ13148 414 aaKnown RBP eCLIP7.8□□□□□ -1.16
NEK3-201ENST00000550331 RTP5Q14D33 572 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 PIP5KL1Q5T9C9 394 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 GPR155Q7Z3F1 870 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 C14orf80Q86SX3 495 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 SETD3Q86TU7 594 aaPredicted RBP7.8□□□□□ -1.16
NEK3-201ENST00000550331 SLC47A2Q86VL8 602 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 IRF2BP1Q8IU81 584 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 CREBRFQ8IUR6 639 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 ZNF683Q8IZ20 524 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 DCAF4L2Q8NA75 395 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 MLKLQ8NB16 471 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 ATP11CQ8NB49 1132 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 TMEM35BQ8NCS4 154 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 TMIEQ8NEW7 156 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 OR2A12Q8NGT7 310 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 KLHDC7BQ96G42 594 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 C1orf74Q96LT6 269 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 PSMB7Q99436 277 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 TKTL2Q9H0I9 626 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 WDCPQ9H6R7 721 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 SIX2Q9NPC8 291 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 PIGVQ9NUD9 493 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.8□□□□□ -1.16
NEK3-201ENST00000550331 VPS51Q9UID3 782 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 DNAJC12Q9UKB3 198 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 CLCA2Q9UQC9 943 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 MAP4K5Q9Y4K4 846 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 AK5Q9Y6K8 562 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 PTPN13Q12923 2485 aa7.8□□□□□ -1.16
NEK3-201ENST00000550331 IGLV3-10A0A075B6K4 115 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 CXorf51AA0A1B0GTR3 108 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 A0A1W2PQU0 124 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 I6L893 689 aaPredicted RBP7.79□□□□□ -1.16
NEK3-201ENST00000550331 KPNA3O00505 521 aaPredicted RBP7.79□□□□□ -1.16
NEK3-201ENST00000550331 ARHGAP6O43182 974 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 BNIP3LO60238 219 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 CNTN5O94779 1100 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 ADCY5O95622 1261 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 MT-CO1P00395 513 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 CTSLP07711 333 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 RHOCP08134 193 aa7.79□□□□□ -1.16
NEK3-201ENST00000550331 THEGLP0DJG4 465 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms