RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 DHRSXQ8N5I4 330 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 C7orf31Q8N865 590 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 SLC4A11Q8NBS3 891 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 FNIP1Q8TF40 1166 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 HTR3CQ8WXA8 447 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 STARD8Q92502 1023 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 MFSD3Q96ES6 412 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 SNX27Q96L92 541 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 SEPHS2Q99611 448 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 EHD1Q9H4M9 534 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 KLHL8Q9P2G9 620 aaPredicted RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 GNPTGQ9UJJ9 305 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 CROTQ9UKG9 612 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 CNTN6Q9UQ52 1028 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 PCDHGA7Q9Y5G6 932 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 TMEM114B3SHH9 223 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 MAGP20916 626 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 MATN1P21941 496 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 SLC7A1P30825 629 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 NIPAL4Q0D2K0 466 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 BAATQ14032 418 aaPredicted RBP12.27□□□□□ -0.44
VDR-208ENST00000550325 KCNJ8Q15842 424 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 PPP1R3AQ16821 1122 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 INSCQ1MX18 579 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 BOLA3Q53S33 107 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 NHSL2Q5HYW2 709 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 TRNP1Q6NT89 227 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 ABRAXAS1Q6UWZ7 409 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 C12orf29Q8N999 325 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 SHCBP1Q8NEM2 672 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 CHPT1Q8WUD6 406 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 TFAP2CQ92754 450 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 SLCO4A1Q96BD0 722 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 PDCD2LQ9BRP1 358 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 MUC3BQ9H195 1237 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 ERGIC3Q9Y282 383 aa12.27□□□□□ -0.44
VDR-208ENST00000550325 RNF103O00237 685 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 ICAM1P05362 532 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 PABPC1P11940 636 aaKnown RBP12.27□□□□□ -0.45
VDR-208ENST00000550325 IL4RP24394 825 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 ALDH4A1P30038 563 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 TAZQ16635 292 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 STXBP5Q5T5C0 1151 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 GRTP1Q5TC63 336 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 ACDQ96AP0 544 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 CPB2Q96IY4 423 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 CPNE1Q99829 537 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 NACA2Q9H009 215 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 JPH1Q9HDC5 661 aaPredicted RBP12.27□□□□□ -0.45
VDR-208ENST00000550325 FEM1BQ9UK73 627 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 NEMP2A6NFY4 417 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 UBDO15205 165 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 INPP4BO15327 924 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 MYO1DO94832 1006 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 ELK4P28324 431 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 CAPRIN1Q14444 709 aaKnown RBP12.27□□□□□ -0.45
VDR-208ENST00000550325 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 PYROXD2Q8N2H3 581 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 NRBF2Q96F24 287 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 FCRL3Q96P31 734 aaPredicted RBP12.27□□□□□ -0.45
VDR-208ENST00000550325 UNC93B1Q9H1C4 597 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 RAD21L1Q9H4I0 556 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 GGA3Q9NZ52 723 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 GIT1Q9Y2X7 761 aa12.27□□□□□ -0.45
VDR-208ENST00000550325 NR5A2O00482 541 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 AQP9O43315 295 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 ASPAP45381 313 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 HSD17B4P51659 736 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 CLDN10P78369 228 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.45
VDR-208ENST00000550325 FUT11Q495W5 492 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 LIPMQ5VYY2 423 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 EXT2Q93063 718 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 GLT1D1Q96MS3 346 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 PALMDQ9NP74 551 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 MRPL40Q9NQ50 206 aaKnown RBP12.26□□□□□ -0.45
VDR-208ENST00000550325 OXSMQ9NWU1 459 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 NCKIPSDQ9NZQ3 722 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 CNOT11Q9UKZ1 510 aaKnown RBP12.26□□□□□ -0.45
VDR-208ENST00000550325 INO80B-WBP1J3KQ70 363 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 FASP25445 335 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 OPRL1P41146 370 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 GRM5P41594 1212 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 PIGFQ07326 219 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 POLD3Q15054 466 aaPredicted RBP12.26□□□□□ -0.45
VDR-208ENST00000550325 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 WDR49Q8IV35 697 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 CNTD1Q8N815 330 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
VDR-208ENST00000550325 TTC16Q8NEE8 873 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 RBBP8Q99708 897 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 TPK1Q9H3S4 243 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 XPR1Q9UBH6 696 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 SEPT3Q9UH03 358 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 SNX9Q9Y5X1 595 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 TLL2Q9Y6L7 1015 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 KRT75O95678 551 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 ITGB3P05106 788 aa12.26□□□□□ -0.45
VDR-208ENST00000550325 TPSB2P20231 275 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms