RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 PCDHB7Q9Y5E2 793 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 CFAP47Q6ZTR5 3102 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 ABCB11O95342 1321 aa4.7□□□□□ -1.66
CBX5-203ENST00000547872 FNDC1Q4ZHG4 1894 aaPredicted RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 PLIN4Q96Q06 1357 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 EIF4E1BA6NMX2 242 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 CYSRT1A8MQ03 144 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 FOXN3O00409 490 aaPredicted RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 CCP110O43303 1012 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 SUV39H1O43463 412 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 PRC1O43663 620 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 RGS10O43665 173 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 CAND2O75155 1236 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 RASAL1O95294 804 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 ONECUT2O95948 504 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 TOP3BO95985 862 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 SLC3A2P08195 630 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 HOXB8P17481 243 aaPredicted RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 GNALP38405 381 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 PDE1AP54750 535 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 ARHGAP8P85298 464 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 MGAT3Q09327 533 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 PPFIA1Q13136 1202 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 SRSF5Q13243 272 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 SMC1AQ14683 1233 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 PTPN14Q15678 1187 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 FBXO47Q5MNV8 452 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 CELF3Q5SZQ8 465 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 DCLRE1AQ6PJP8 1040 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 C19orf48Q6RUI8 117 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 TRMT1LQ7Z2T5 733 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 ERC1Q8IUD2 1116 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 YAF2Q8IY57 180 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 KRT78Q8N1N4 520 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 CLASRPQ8N2M8 674 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 LRRC71Q8N4P6 559 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 PJA1Q8NG27 643 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 TRAPPC12Q8WVT3 735 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 PIBF1Q8WXW3 757 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 MRPS27Q92552 414 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 GLG1Q92896 1179 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 PHKBQ93100 1093 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 UROC1Q96N76 676 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 HAPLN3Q96S86 360 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 STRBPQ96SI9 672 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 SEC62Q99442 399 aaKnown RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 C16orf70Q9BSU1 422 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 CPNE5Q9HCH3 593 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 PXMP2Q9NR77 195 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 IL17RBQ9NRM6 502 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 ASB6Q9NWX5 421 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 TUBE1Q9UJT0 475 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 ZNF215Q9UL58 517 aaPredicted RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 SH2B3Q9UQQ2 575 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 ENTPD2Q9Y5L3 495 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 MIA3Q5JRA6 1907 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 LOXHD1Q8IVV2 1947 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
CBX5-203ENST00000547872 MYO7AQ13402 2215 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 C2orf16Q68DN1 1984 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 CACNA1GO43497 2377 aa4.69□□□□□ -1.66
CBX5-203ENST00000547872 LAMA4Q16363 1823 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 FSD2A1L4K1 749 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 A1L4Q6 167 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 RAB27BO00194 218 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 ANP32CO43423 234 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 SRGAP2O75044 1071 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 INMTO95050 263 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 KRT18P05783 430 aaKnown RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 PROS1P07225 676 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 FESP07332 822 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 GPD1P21695 349 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 ACVR2AP27037 513 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 PRKAR1BP31321 381 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 LIPAP38571 399 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 CARSP49589 748 aaKnown RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 CLK3P49761 638 aaKnown RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 CCT8P50990 548 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 MRPS6P82932 125 aaKnown RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 SLC29A2Q14542 456 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 SBK1Q52WX2 424 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 CERCAMQ5T4B2 595 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 ZSCAN25Q6NSZ9 544 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 MAML2Q8IZL2 1156 aaPredicted RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 BOLLQ8N9W6 283 aaKnown RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 TMEM171Q8WVE6 324 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 XAGE5Q8WWM1 108 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 NELL1Q92832 810 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 R3HDM4Q96D70 268 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 ZNF668Q96K58 619 aaPredicted RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 ZNF558Q96NG5 402 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 UNKQ9C0B0 810 aaKnown RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 KLK15Q9H2R5 256 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 MID2Q9UJV3 735 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 PADI3Q9ULW8 664 aa4.68□□□□□ -1.66
CBX5-203ENST00000547872 NDRG2Q9UN36 371 aaKnown RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 MTF2Q9Y483 593 aaPredicted RBP4.68□□□□□ -1.66
CBX5-203ENST00000547872 TRPV2Q9Y5S1 764 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms