RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 IQANK1A0A1B0GTG1 560 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 CCDC195A0A1B0GUA6 201 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 WASH4PA8MWX3 477 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 BAIAP3O94812 1187 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 SLC4A1P02730 911 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 ALDOAP04075 364 aaKnown RBP13.89□□□□□ -0.19
HCFC2-202ENST00000544223 TAC1P20366 129 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 MZF1P28698 734 aaPredicted RBP13.89□□□□□ -0.19
HCFC2-202ENST00000544223 NDST2P52849 883 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 HTRA4P83105 476 aaPredicted RBP13.89□□□□□ -0.19
HCFC2-202ENST00000544223 CDH17Q12864 832 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 CTBP1Q13363 440 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 PACS1Q6VY07 963 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 UBE2Q1Q7Z7E8 422 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 DENND6AQ8IWF6 608 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 RIN3Q8TB24 985 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 CENPTQ96BT3 561 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 VAT1Q99536 393 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 SEMA3CQ99985 751 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 OXCT2Q9BYC2 517 aaPredicted RBP13.89□□□□□ -0.19
HCFC2-202ENST00000544223 ACSS2Q9NR19 701 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 UXTQ9UBK9 157 aaPredicted RBP13.89□□□□□ -0.19
HCFC2-202ENST00000544223 HBS1LQ9Y450 684 aaKnown RBP13.89□□□□□ -0.19
HCFC2-202ENST00000544223 SLC4A7Q9Y6M7 1214 aa13.89□□□□□ -0.19
HCFC2-202ENST00000544223 AURKAO14965 403 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 DNAJC6O75061 913 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 VAPBO95292 243 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 HOXD9P28356 352 aaPredicted RBP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 GNA12Q03113 381 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 OVGP1Q12889 678 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 LBRQ14739 615 aaKnown RBP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 CNGA3Q16281 694 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 HHATQ5VTY9 493 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 SNX30Q5VWJ9 437 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 LDB1Q86U70 411 aaPredicted RBP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 NDUFAF2Q8N183 169 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 KREMEN2Q8NCW0 462 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 MYLIPQ8WY64 445 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 SRPK1Q96SB4 655 aaKnown RBP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 TLR9Q9NR96 1032 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 NOTCH4Q99466 2003 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 TPP1O14773 563 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 GRM6O15303 877 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 PRPF4O43172 522 aaKnown RBP eCLIP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 CACNG3O60359 315 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 TBL1XO60907 577 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 SPAG6O75602 509 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 SNRPAP09012 282 aaKnown RBP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 GBP2P32456 591 aaPredicted RBP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 ADRA1AP35348 466 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 RENBPP51606 427 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 TMPRSS15P98073 1019 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 CAMK1Q14012 370 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 ADGRF1Q5T601 910 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 RNF219Q5W0B1 726 aaPredicted RBP13.88□□□□□ -0.19
HCFC2-202ENST00000544223 CES4AQ5XG92 561 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 POTEHQ6S545 545 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 STRA8Q7Z7C7 330 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 TMEM135Q86UB9 458 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 PDZD8Q8NEN9 1154 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 OR6K2Q8NGY2 324 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 MOCOSQ96EN8 888 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 MUC3BQ9H195 1237 aa13.88□□□□□ -0.19
HCFC2-202ENST00000544223 OR51F1A6NGY5 319 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 K7ERQ8 282 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 GREM1O60565 184 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 MT-CO1P00395 513 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 LRG1P02750 347 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 EPCAMP16422 314 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 PPM1AP35813 382 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 MPP1Q00013 466 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 PPIGQ13427 754 aaKnown RBP eCLIP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 HNRNPDQ14103 355 aaKnown RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF460Q14592 562 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 CBX2Q14781 532 aaPredicted RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 NAPEPLDQ6IQ20 393 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 TIGD7Q6NT04 549 aaPredicted RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 KDELC1Q6UW63 502 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 KCNMB4Q86W47 210 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 BBS7Q8IWZ6 715 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 ARMC2Q8NEN0 867 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 ARRDC2Q8TBH0 407 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 CLP1Q92989 425 aaKnown RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 ATP13A1Q9HD20 1204 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 CFAP97Q9P2B7 532 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 CDH22Q9UJ99 828 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 AAR2Q9Y312 384 aaKnown RBP13.87□□□□□ -0.19
HCFC2-202ENST00000544223 ACTL7BQ9Y614 415 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 C2orf71A6NGG8 1288 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 EBAG9O00559 213 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 KRT37O76014 449 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 C1RP00736 705 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 TSHRP16473 764 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 ARNTP27540 789 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 AVPR1AP37288 418 aa13.87□□□□□ -0.19
HCFC2-202ENST00000544223 SCNN1BP51168 640 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms