RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 KDM1BQ8NB78 822 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 ADAM32Q8TC27 787 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 KCTD4Q8WVF5 259 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 EMID1Q96A84 441 aaPredicted RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 HDAC11Q96DB2 347 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 ZNF560Q96MR9 790 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 KLHL32Q96NJ5 620 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 GPR78Q96P69 363 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 APBA2Q99767 749 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 GRIP2Q9C0E4 1043 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 SENP6Q9GZR1 1112 aaPredicted RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 MRPL40Q9NQ50 206 aaKnown RBP9.81□□□□□ -0.84
CDH13-204ENST00000539548 ACSS2Q9NR19 701 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 GPRC5DQ9NZD1 345 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 FBXW11Q9UKB1 542 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 APPL1Q9UKG1 709 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 ACOT9Q9Y305 439 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 SHROOM3Q8TF72 1996 aa9.81□□□□□ -0.84
CDH13-204ENST00000539548 OTOFQ9HC10 1997 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 H3BRB1 525 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 PHGDHO43175 533 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 VAPBO95292 243 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 AHSGP02765 367 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 JUNP05412 331 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 ZNF286BP0CG31 522 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 WARSP23381 471 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 GABRB3P28472 473 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 GLRBP48167 497 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 NDUFV1P49821 464 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 GALNT2Q10471 571 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 ZBTB17Q13105 803 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 PPP2R5DQ14738 602 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 GRIK4Q16099 956 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 UGP2Q16851 508 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 TBC1D25Q3MII6 688 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 MGAT5BQ3V5L5 792 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 NAPEPLDQ6IQ20 393 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 ARMCX2Q7L311 632 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 CATSPER4Q7RTX7 472 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 LINC00523Q86TU6 105 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 KLHDC8BQ8IXV7 354 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 GALNT4Q8N4A0 578 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 RNF148Q8N7C7 305 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 RNF169Q8NCN4 708 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 B3GALNT2Q8NCR0 500 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 CEP70Q8NHQ1 597 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 TOP1MTQ969P6 601 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 ASB9Q96DX5 294 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 TEKT5Q96M29 485 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 TSPAN18Q96SJ8 248 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 PRPF18Q99633 342 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 APOL2Q9BQE5 337 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 MRPL1Q9BYD6 325 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 ADAMTS10Q9H324 1103 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 TUT1Q9H6E5 874 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 WDR6Q9NNW5 1121 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 MRGBPQ9NV56 204 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 THEGQ9P2T0 379 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 EPS15L1Q9UBC2 864 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 NUP205Q92621 2012 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 ZNF236Q9UL36 1845 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 SMIM28A0A1B0GU29 152 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 RBM47A0AV96 593 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 C9IYK1 514 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 GOLGA8TH3BQL2 631 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 SDHDO14521 159 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 CXCL11O14625 94 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 HUS1O60921 280 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 BEST1O76090 585 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 RECQL4O94761 1208 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 FYNP06241 537 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 C8BP07358 591 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 ATP6V1B1P15313 513 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 NPR3P17342 541 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 TAF6P49848 677 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 GJA9P57773 515 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 DNAJB13P59910 316 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 PSME3P61289 254 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 TXNL4AP83876 142 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 TRIM25Q14258 630 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 PTK2BQ14289 1009 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 PRPSAP1Q14558 356 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 SV2CQ496J9 727 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 IL23RQ5VWK5 629 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 NOTUMQ6P988 496 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 HFE2Q6ZVN8 426 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 PAQR9Q6ZVX9 377 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 CHSY3Q70JA7 882 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 OSTM1Q86WC4 334 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 CNTN4Q8IWV2 1026 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 SIX6OS1Q8N1H7 587 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 PELI3Q8N2H9 469 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 NPWQ8N729 165 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 ZSCAN18Q8TBC5 510 aaPredicted RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 DPF3Q92784 378 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 NPAS2Q99743 824 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 TIMMDC1Q9NPL8 285 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 ANLNQ9NQW6 1124 aa9.8□□□□□ -0.84
CDH13-204ENST00000539548 SUCOQ9UBS9 1254 aaKnown RBP9.8□□□□□ -0.84
CDH13-204ENST00000539548 MAGED2Q9UNF1 606 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms