RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZNF212Q9UDV6 495 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 TAGLN3Q9UI15 199 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 ANKRD6Q9Y2G4 727 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 OR6C75A6NL08 312 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 B2RBV5 119 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 CNTN5O94779 1100 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 TBX18O95935 607 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 SBK3P0C264 359 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 SLC35E2BP0CK96 405 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 CHRNA4P43681 627 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 IDH3AP50213 366 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 EFEMP1Q12805 493 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 UBAP2LQ14157 1087 aaKnown RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 GPNMBQ14956 572 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 PSMD5Q16401 504 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 TLDC1Q6P9B6 456 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 TFAP2DQ7Z6R9 452 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 TMPRSS6Q8IU80 811 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 MFSD6LQ8IWD5 586 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 RBM15BQ8NDT2 890 aaKnown RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 CD99L2Q8TCZ2 262 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 HMCESQ96FZ2 354 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 B3GALT6Q96L58 329 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 NUDCD1Q96RS6 583 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 FSD1LQ9BXM9 530 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 ZYG11BQ9C0D3 744 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 FAM96AQ9H5X1 160 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 ELAC1Q9H777 363 aaKnown RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 ARNT2Q9HBZ2 717 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 ATP13A1Q9HD20 1204 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 STARD7Q9NQZ5 370 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 MARCH5Q9NX47 278 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 J3KR12 359 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 TRIM13O60858 407 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 SOAT2O75908 522 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 VNN2O95498 520 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 IGLV3-27P01718 113 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 HAPLN1P10915 354 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 FGFR3P22607 806 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 YWHAQP27348 245 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 PGGT1BP53609 377 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 WNT3AP56704 352 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 MPP1Q00013 466 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 CTBP1Q13363 440 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 USP10Q14694 798 aaKnown RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 TRIP4Q15650 581 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 CNGA3Q16281 694 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 UGP2Q16851 508 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 KIAA0930Q6ICG6 404 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 ZNF280DQ6N043 979 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 LRRC8DQ7L1W4 858 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 CENPLQ8N0S6 344 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 MCUR1Q96AQ8 359 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 IMP4Q96G21 291 aaKnown RBP14.2□□□□□ -0.14
LIMK1-208ENST00000538333 BTN2A3PQ96KV6 586 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 CASD1Q96PB1 797 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 CRISPLD1Q9H336 500 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 ATXN3LQ9H3M9 355 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 OXSMQ9NWU1 459 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 PLA2G4CQ9UP65 541 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 TET1Q8NFU7 2136 aa14.2□□□□□ -0.14
LIMK1-208ENST00000538333 TMEM114B3SHH9 223 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 TK2O00142 265 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 PHGDHO43175 533 aaKnown RBP14.19□□□□□ -0.14
LIMK1-208ENST00000538333 DIAPH2O60879 1101 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 NBNO60934 754 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 SLC1A2P43004 574 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 POLD2P49005 469 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 RENBPP51606 427 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 MSLNQ13421 630 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-208ENST00000538333 RCN2Q14257 317 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 IHHQ14623 411 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 KHDC1Q4VXA5 237 aaKnown RBP14.19□□□□□ -0.14
LIMK1-208ENST00000538333 RASIP1Q5U651 963 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 LCA5Q86VQ0 697 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 C2CD4AQ8NCU7 369 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-208ENST00000538333 RDH11Q8TC12 318 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 PXYLP1Q8TE99 480 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 NSMCE1Q8WV22 266 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 IGSF8Q969P0 613 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 FBXO32Q969P5 355 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 ACE2Q9BYF1 805 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-208ENST00000538333 APOBEC2Q9Y235 224 aaKnown RBP14.19□□□□□ -0.14
LIMK1-208ENST00000538333 CHD5Q8TDI0 1954 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-208ENST00000538333 MTMR11A4FU01 709 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 TARM1B6A8C7 271 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 ARVCFO00192 962 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 ENPP3O14638 875 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 TBC1D4O60343 1298 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 MAGEC1O60732 1142 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 H2AFYO75367 372 aaKnown RBP14.19□□□□□ -0.14
LIMK1-208ENST00000538333 APOA4P06727 396 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 MMP2P08253 660 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 MYL4P12829 197 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 SELPP16109 830 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 DNAJB1P25685 340 aa14.19□□□□□ -0.14
LIMK1-208ENST00000538333 HOXD10P28358 340 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms