RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NLRP14Q86W24 1093 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 ASPMQ8IZT6 3477 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 CCDC185Q8N715 623 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 TMEM145Q8NBT3 493 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 C3orf20Q8ND61 904 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 ARHGEF2Q92974 986 aaKnown RBP9.08□□□□□ -0.96
COPB1-211ENST00000534234 FEM1CQ96JP0 617 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 ERGIC2Q96RQ1 377 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 AGPAT1Q99943 283 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 MAGEH1Q9H213 219 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 TMEM248Q9NWD8 314 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 HECAQ9UBI9 543 aaPredicted RBP9.08□□□□□ -0.96
COPB1-211ENST00000534234 HPCAL4Q9UM19 191 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 ZFR2Q9UPR6 939 aaKnown RBP9.08□□□□□ -0.96
COPB1-211ENST00000534234 PCDHGA1Q9Y5H4 931 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 IGF2RP11717 2491 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 CXorf51AA0A1B0GTR3 108 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 RAMP2O60895 175 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 SDC3O75056 442 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 PAK4O96013 591 aaPredicted RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 C1SP09871 688 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 CDK4P11802 303 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 JUPP14923 745 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 HNRNPA2B1P22626 353 aaKnown RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 ITGB7P26010 798 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 AKT2P31751 481 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 L1CAMP32004 1257 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 NEK3P51956 506 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 GSCP56915 257 aaPredicted RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 GEMIN4P57678 1058 aaKnown RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 POLD3Q15054 466 aaPredicted RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 SEL1L3Q68CR1 1132 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 SCYL2Q6P3W7 929 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 APTXQ7Z2E3 356 aaKnown RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 KANSL1Q7Z3B3 1105 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 SLFN11Q7Z7L1 901 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 TMPRSS12Q86WS5 348 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 RYBPQ8N488 228 aaPredicted RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 NTAN1Q96AB6 310 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 ISG20Q96AZ6 181 aaKnown RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 TBC1D31Q96DN5 1066 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 SLC17A9Q9BYT1 436 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 TM6SF2Q9BZW4 377 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 HSD3B7Q9H2F3 369 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 ZDHHC6Q9H6R6 413 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 FZD3Q9NPG1 666 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 ANKRD62A6NC57 917 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 KDELR3O43731 214 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 RFPL3O75679 317 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 POP4O95707 220 aaKnown RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 MBD3O95983 291 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 CCDC172P0C7W6 258 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 ATP1A3P13637 1013 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 ADRB3P13945 408 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 CKMT2P17540 419 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 GKP32189 559 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 ZNF143P52747 638 aaPredicted RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 CLDN2P57739 230 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 RPL7AP62424 266 aaKnown RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 RPS21P63220 83 aaKnown RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 CYP4F3Q08477 520 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 CAMK2BQ13554 666 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 TMEM259Q4ZIN3 620 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 CCDC183Q5T5S1 534 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 DNAJC24Q6P3W2 148 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 LEKR1Q6ZMV7 388 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 MON1BQ7L1V2 547 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 ZNF354CQ86Y25 554 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 PYROXD2Q8N2H3 581 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 SLC25A45Q8N413 288 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 AOPEPQ8N6M6 819 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 PDCD7Q8N8D1 485 aaKnown RBP9.07□□□□□ -0.96
COPB1-211ENST00000534234 OR13H1Q8NG92 308 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 OR6K2Q8NGY2 324 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 TSC1Q92574 1164 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 LRIG1Q96JA1 1093 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 CALN1Q9BXU9 219 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 KLHL11Q9NVR0 708 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 FADS3Q9Y5Q0 445 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 HS3ST3A1Q9Y663 406 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 KNL1Q8NG31 2342 aa9.07□□□□□ -0.96
COPB1-211ENST00000534234 CHD6Q8TD26 2715 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 TCRBV5S1A1TA0A578 114 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 C16orf96A6NNT2 1141 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 KRIT1O00522 736 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 TRIM38O00635 465 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 NEMP1O14524 444 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 TEX33O43247 280 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 CCP110O43303 1012 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 BUB1O43683 1085 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 AP1G1O43747 822 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 CREB3O43889 395 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 FERP16591 822 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 TNFAIP3P21580 790 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 DGKAP23743 735 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 EPHB2P29323 1055 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 ACADVLP49748 655 aa9.06□□□□□ -0.96
COPB1-211ENST00000534234 SNRPD1P62314 119 aaKnown RBP9.06□□□□□ -0.96
COPB1-211ENST00000534234 SGCGQ13326 291 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms