RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 C22orf39Q6P5X5 142 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 C11orf57Q6ZUT1 292 aaPredicted RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 TTC9Q92623 222 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 ARRDC3Q96B67 414 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 ARHGEF26Q96DR7 871 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 KREMEN1Q96MU8 473 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 SLC2A13Q96QE2 648 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 ARHGAP9Q9BRR9 750 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 SEMA4CQ9C0C4 833 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 INTS2Q9H0H0 1204 aaKnown RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 WDCPQ9H6R7 721 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 STAP1Q9ULZ2 295 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 DOLKQ9UPQ8 538 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 ZFR2Q9UPR6 939 aaKnown RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 OR51B4Q9Y5P0 310 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 CCDC187A0A096LP49 1063 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 EME2A4GXA9 379 aaPredicted RBP11.79□□□□□ -0.52
CMTM1-216ENST00000533078 TMX2-CTNND1H3BSU7 103 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 MUSKO15146 869 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 AP1G1O43747 822 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 SNAP91O60641 907 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 TNFSF15O95150 251 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 MT-CO1P00395 513 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 GIMD1P0DJR0 217 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 ITGB7P26010 798 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 OR1E1P30953 314 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 GGCXP38435 758 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 SLC20A2Q08357 652 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 FZD2Q14332 565 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 DEFB133Q30KQ1 61 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 KIAA1614Q5VZ46 1190 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 XKR5Q6UX68 686 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 PCDH20Q8N6Y1 951 aaKnown RBP11.79□□□□□ -0.52
CMTM1-216ENST00000533078 CHST14Q8NCH0 376 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 DENND6BQ8NEG7 585 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 OR52K2Q8NGK3 314 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 LMO3Q8TAP4 145 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 SCG3Q8WXD2 468 aaKnown RBP11.79□□□□□ -0.52
CMTM1-216ENST00000533078 RAB7BQ96AH8 199 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 BMFQ96LC9 184 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 CCNL2Q96S94 520 aaPredicted RBP11.79□□□□□ -0.52
CMTM1-216ENST00000533078 HEPHQ9BQS7 1158 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 SPON2Q9BUD6 331 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 C1QTNF7Q9BXJ2 289 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 SLC13A1Q9BZW2 595 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 CEP44Q9C0F1 390 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 STRADBQ9C0K7 418 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 TKTL2Q9H0I9 626 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 TNKS2Q9H2K2 1166 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 APOBEC3BQ9UH17 382 aaKnown RBP11.79□□□□□ -0.52
CMTM1-216ENST00000533078 ENTPD2Q9Y5L3 495 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 BSNQ9UPA5 3926 aa11.79□□□□□ -0.52
CMTM1-216ENST00000533078 LY6G6EA0A0G2JKS1 128 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 POM121BA6NF01 834 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 K7ERQ8 282 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 TSPAN6O43657 245 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 DAB1O75553 588 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 ENDOD1O94919 500 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 GJB6O95452 261 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 F9P00740 461 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 ANXA6P08133 673 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 ITGA2BP08514 1039 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 L1CAMP32004 1257 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 KRT9P35527 623 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 CSRP3P50461 194 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 INHBCP55103 352 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 EIF3IQ13347 325 aaKnown RBP11.78□□□□□ -0.52
CMTM1-216ENST00000533078 C5orf22Q49AR2 442 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 CRTC1Q6UUV9 634 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 LINGO4Q6UY18 593 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 ZNF783Q6ZMS7 281 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 DPY19L3Q6ZPD9 716 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 FAM183BPQ6ZVS7 135 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 TFAP2DQ7Z6R9 452 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 ZDHHC17Q8IUH5 632 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 PASD1Q8IV76 773 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
CMTM1-216ENST00000533078 RYBPQ8N488 228 aaPredicted RBP11.78□□□□□ -0.52
CMTM1-216ENST00000533078 LENG8Q96PV6 779 aaPredicted RBP11.78□□□□□ -0.52
CMTM1-216ENST00000533078 CPXM1Q96SM3 734 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 PDCL3Q9H2J4 239 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 FADS3Q9Y5Q0 445 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 U3KQA8 63 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
CMTM1-216ENST00000533078 HECTD1Q9ULT8 2610 aa11.77□□□□□ -0.52
CMTM1-216ENST00000533078 ILVBLA1L0T0 632 aa11.77□□□□□ -0.53
CMTM1-216ENST00000533078 CDRT15L2A8MXV6 281 aa11.77□□□□□ -0.53
CMTM1-216ENST00000533078 SMAD6O43541 496 aaKnown RBP11.77□□□□□ -0.53
CMTM1-216ENST00000533078 CNTN5O94779 1100 aa11.77□□□□□ -0.53
CMTM1-216ENST00000533078 SFTPCP11686 197 aa11.77□□□□□ -0.53
CMTM1-216ENST00000533078 ETFBP38117 255 aa11.77□□□□□ -0.53
CMTM1-216ENST00000533078 SULT1E1P49888 294 aa11.77□□□□□ -0.53
CMTM1-216ENST00000533078 SERPINH1P50454 418 aaKnown RBP11.77□□□□□ -0.53
CMTM1-216ENST00000533078 BLKP51451 505 aa11.77□□□□□ -0.53
CMTM1-216ENST00000533078 IRAK1P51617 712 aa11.77□□□□□ -0.53
CMTM1-216ENST00000533078 GEMIN4P57678 1058 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms