RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TC2NQ8N9U0 490 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 FAM184AQ8NB25 1140 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 OR13C2Q8NGS9 318 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ZNF671Q8TAW3 534 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 SNX33Q8WV41 574 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CLEC4DQ8WXI8 215 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 RAPGEF4Q8WZA2 1011 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 SGCDQ92629 289 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 BCL2L2Q92843 193 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 SMARCE1Q969G3 411 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 LENG1Q96BZ8 264 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 KLHL29Q96CT2 875 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 HDAC11Q96DB2 347 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 MASTLQ96GX5 879 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 LINC00615Q96LM1 132 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 SAMD8Q96LT4 415 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 UHRF1Q96T88 793 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 CD180Q99467 661 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 PARK7Q99497 189 aaKnown RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 PKP2Q99959 881 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 TUBA1CQ9BQE3 449 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 NUDT22Q9BRQ3 303 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CARD6Q9BX69 1037 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ZNF350Q9GZX5 532 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 SLC25A32Q9H2D1 315 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 XKR8Q9H6D3 395 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 NRDE2Q9H7Z3 1164 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 TMEM206Q9H813 350 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 BCO1Q9HAY6 547 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 HPS4Q9NQG7 708 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 FAM114A2Q9NRY5 505 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 FAM105AQ9NUU6 356 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ALKBH4Q9NXW9 302 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 KCNK4Q9NYG8 393 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.6□□□□□ -1.67
CD44-213ENST00000525209 UBAP1Q9NZ09 502 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.6□□□□□ -1.67
CD44-213ENST00000525209 ANKMY1Q9P2S6 941 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ASH2LQ9UBL3 628 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 GULP1Q9UBP9 304 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 IPO11Q9UI26 975 aaKnown RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 CNOT6Q9ULM6 557 aaKnown RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 GABRQQ9UN88 632 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 SLC8A2Q9UPR5 921 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 HPSEQ9Y251 543 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 RUVBL1Q9Y265 456 aaKnown RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 DLGAP4Q9Y2H0 992 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 SLC4A4Q9Y6R1 1079 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 TNIKQ9UKE5 1360 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 GRIN2AQ12879 1464 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 A0A0A6YYK5 440 aaPredicted RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 SCO2A0A1W2PP80 73 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 ZSCAN5BA6NJL1 495 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 SLC38A8A6NNN8 435 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 LDLRAD4O15165 306 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 CUTAO60888 179 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 GPR32O75388 356 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 DEAF1O75398 565 aaPredicted RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 MPIG6BO95866 241 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 IL1AP01583 271 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 FUCA1P04066 466 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 GNAI3P08754 354 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 FAM86B2P0C5J1 330 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 DLATP10515 647 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 SRFP11831 508 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 TRIM21P19474 475 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 IL13P35225 146 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 CPOXP36551 454 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 CUX1P39880 1505 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 KIR3DL1P43629 444 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 ABCG1P45844 678 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 OR1G1P47890 313 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 PTDSS1P48651 473 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 HK2P52789 917 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 PDE1AP54750 535 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 VCPP55072 806 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 PCBP3P57721 371 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 GNAI1P63096 354 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 CEBPZQ03701 1054 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 DDX39BQ13838 428 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 RRS1Q15050 365 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 SGCBQ16585 318 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 CYP2A13Q16696 494 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 PFKFB3Q16875 520 aaPredicted RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 FUT11Q495W5 492 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 FBLN7Q53RD9 439 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 MAP3K19Q56UN5 1328 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 MFSD14BQ5SR56 506 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 C1orf185Q5T7R7 199 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 ATAD3BQ5T9A4 648 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 FCRLBQ6BAA4 426 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 GRAMD4Q6IC98 578 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 JADE1Q6IE81 842 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 KLC3Q6P597 504 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 PSRC1Q6PGN9 363 aaPredicted RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 PAPD4Q6PIY7 484 aaKnown RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 OGFOD3Q6PK18 319 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 METAP1DQ6UB28 335 aaPredicted RBP4.59□□□□□ -1.67
CD44-213ENST00000525209 CEP128Q6ZU80 1094 aa4.59□□□□□ -1.67
CD44-213ENST00000525209 VASH2Q86V25 355 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms