RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 INAFM1C9JVW0 142 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 NTN3O00634 580 aaPredicted RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 TSPAN6O43657 245 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 HTATSF1O43719 755 aaKnown RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 CNTN5O94779 1100 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 SYF2O95926 243 aaKnown RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 ACAA1P09110 424 aaPredicted RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 SLC5A1P13866 664 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 AKR1A1P14550 325 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 PECAM1P16284 738 aaPredicted RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 EGR1P18146 543 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 FGFR2P21802 821 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 HOXD10P28358 340 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 GMPSP49915 693 aaPredicted RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 PDLIM4P50479 330 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 CASP5P51878 434 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 DSCR9P59020 149 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 ANAPC15P60006 121 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 FKBP1AP62942 108 aaKnown RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 ABATP80404 500 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 SP3Q02447 781 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 CXCL9Q07325 125 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 ILF3Q12906 894 aaKnown RBP eCLIP1.91□□□□□ -2.1
CD44-212ENST00000524922 SEMA3BQ13214 749 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 TBC1D9BQ66K14 1250 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 DHRS13Q6UX07 377 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 GSG1LQ6UXU4 331 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 TRAPPC11Q7Z392 1133 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 ARMC9Q7Z3E5 817 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 NBPF5PQ86XG9 351 aaPredicted RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 APOBEC3FQ8IUX4 373 aaKnown RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 OR4N4Q8N0Y3 316 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 TTC5Q8N0Z6 440 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 DEFB123Q8N688 67 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 ZBTB8BQ8NAP8 495 aaPredicted RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 ATP11CQ8NB49 1132 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 NEXN-AS1Q8NBZ9 246 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 ELP5Q8TE02 316 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 DNASE2BQ8WZ79 361 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 ATP2A3Q93084 1043 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 MED30Q96HR3 178 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 LMLNQ96KR4 655 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 EYA3Q99504 573 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 NUDT22Q9BRQ3 303 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 GLIS2Q9BZE0 524 aaPredicted RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 MAGEH1Q9H213 219 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 PLAC1Q9HBJ0 212 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 SLC45A1Q9Y2W3 748 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 TRIM17Q9Y577 477 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 INSL5Q9Y5Q6 135 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 FLNBO75369 2602 aaKnown RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 FRMPD2Q68DX3 1309 aaPredicted RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 FASNP49327 2511 aaKnown RBP1.9□□□□□ -2.1
CD44-212ENST00000524922 SCN11AQ9UI33 1791 aa1.9□□□□□ -2.1
CD44-212ENST00000524922 USP34Q70CQ2 3546 aa1.9□□□□□ -2.1
CD44-212ENST00000524922 ZFHX2Q9C0A1 2572 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 SPTBN4Q9H254 2564 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 GPR179Q6PRD1 2367 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 XIRP2A4UGR9 3374 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 SRRM3A6NNA2 597 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 BECN2A8MW95 431 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 TTC34A8MYJ7 566 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 FOXO6A8MYZ6 492 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 I6L893 689 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 RHODO00212 210 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 ACOT8O14734 319 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 PPIP5K2O43314 1243 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 RGS14O43566 566 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 MGEA5O60502 916 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 TAF5LO75529 589 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 NEURL1O76050 574 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 ITGA5P08648 1049 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 MMP8P22894 467 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 SLC8A1P32418 973 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 POLE2P56282 527 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 SLC37A1P57057 533 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 FOXL2P58012 376 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 UBXN2AP68543 259 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 IGBP1P78318 339 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 CRYZQ08257 329 aaKnown RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 KIF5AQ12840 1032 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 GPS2Q13227 327 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 BFSP2Q13515 415 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 PKP1Q13835 747 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 EIF4A2Q14240 407 aaKnown RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 PPP2R5AQ15172 486 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 AAK1Q2M2I8 961 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 KRTAP27-1Q3LI81 207 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 ANXA2RQ3ZCQ2 193 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 HSP90AB3PQ58FF7 597 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 Q5PR19 223 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 FAXCQ5TGI0 409 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 ZNF530Q6P9A1 599 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 ZNF790Q6PG37 636 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 USP17L6PQ6QN14 398 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 PRSS57Q6UWY2 283 aa1.9□□□□□ -2.11
CD44-212ENST00000524922 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.9□□□□□ -2.11
CD44-212ENST00000524922 FAM83HQ6ZRV2 1179 aaPredicted RBP1.9□□□□□ -2.11
CD44-212ENST00000524922 MDGA2Q7Z553 956 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms