RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 C4BPAP04003 597 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 JMJD7P0C870 316 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 LIFP15018 202 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 HNRNPA2B1P22626 353 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 KLRB1Q12918 225 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 C1orf61Q13536 156 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 EFHC2Q5JST6 749 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 LCE2CQ5TA81 110 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 PM20D1Q6GTS8 502 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 SPOPLQ6IQ16 392 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 UNC93AQ86WB7 457 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 HORMAD1Q86X24 394 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 GALNT11Q8NCW6 608 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 NAT6Q93015 286 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 ZNF837Q96EG3 531 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 EPSTI1Q96J88 318 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 SPAG5Q96R06 1193 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 CLPBQ9H078 707 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 NUCKS1Q9H1E3 243 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 SYNDIG1Q9H7V2 258 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 HBS1LQ9Y450 684 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 DCHS2Q6V1P9 2916 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 POLEQ07864 2286 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 LMO7DNF2Z398 122 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 TULP2O00295 520 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 YY2O15391 372 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 DUX1O43812 170 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 CTSLP07711 333 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 CELA2BP08218 269 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 CCL4P13236 92 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 AKT2P31751 481 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 ADKP55263 362 aaKnown RBP9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 INCA1Q0VD86 236 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 RILPL1Q5EBL4 403 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 NEK5Q6P3R8 708 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 PIGZQ86VD9 579 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 PARGQ86W56 976 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 CFAP52Q8N1V2 620 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 SDR16C5Q8N3Y7 309 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 EDEM1Q92611 657 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 CCDC74AQ96AQ1 378 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 TCTN2Q96GX1 697 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 GFM1Q96RP9 751 aaKnown RBP9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 IL12RB2Q99665 862 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 LLPHQ9BRT6 129 aaKnown RBP9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 STRADBQ9C0K7 418 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 KIAA1586Q9HCI6 787 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 GPAMQ9HCL2 828 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 AGPAT3Q9NRZ7 376 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 ZDHHC3Q9NYG2 299 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 DONSONQ9NYP3 566 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 TP53TG5Q9Y2B4 290 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 HS3ST3A1Q9Y663 406 aa9.11□□□□□ -0.95
TRAPPC9-212ENST00000521944 A0A087X0B3 334 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 A6NNZ2 444 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 TMX2-CTNND1H3BSU7 103 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 CLIC2O15247 247 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 KIF20AO95235 890 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 RPLP0P05388 317 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 MSX1P28360 303 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 NEK4P51957 841 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 MAPK10P53779 464 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 EPHA4P54764 986 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 ANAPC15P60006 121 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 ALCAMQ13740 583 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 LACTB2Q53H82 288 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 NUGGCQ68CJ6 796 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 KYAT3Q6YP21 454 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 PTAR1Q7Z6K3 402 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 DCP2Q8IU60 420 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 SLC9A9Q8IVB4 645 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 FAM114A1Q8IWE2 563 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 CARNMT1Q8N4J0 409 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 KYQ8NBH2 561 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 KLF6Q99612 283 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 LRRC61Q9BV99 259 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 LRRN3Q9H3W5 708 aa9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 DIDO1Q9BTC0 2240 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-212ENST00000521944 LRRIQ3A6PVS8 624 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 YJEFN3A6XGL0 299 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 E7ENQ6 273 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 MCF2LO15068 1137 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 IRAK2O43187 625 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 STX6O43752 255 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 ACSL4O60488 711 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 PHACTR2O75167 634 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 VPS4BO75351 444 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 DDAH2O95865 285 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 ZBED1O96006 694 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 PAK4O96013 591 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 LDLRP01130 860 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 IDEP14735 1019 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 TSHRP16473 764 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 CD82P27701 267 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 GJB2P29033 226 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 OAS2P29728 719 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 UGT1A3P35503 534 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 LONP1P36776 959 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 CYP2J2P51589 502 aa9.09□□□□□ -0.95
TRAPPC9-212ENST00000521944 TKTL1P51854 596 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms