RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 USP33Q8TEY7 942 aa14.74□□□□□ -0.05
CLN8-204ENST00000519254 MZB1Q8WU39 189 aa14.74□□□□□ -0.05
CLN8-204ENST00000519254 SLC44A1Q8WWI5 657 aa14.74□□□□□ -0.05
CLN8-204ENST00000519254 PABPC5Q96DU9 382 aaKnown RBP14.74□□□□□ -0.05
CLN8-204ENST00000519254 RIPOR3Q96MK2 946 aa14.74□□□□□ -0.05
CLN8-204ENST00000519254 IL12RB2Q99665 862 aa14.74□□□□□ -0.05
CLN8-204ENST00000519254 INTS9Q9NV88 658 aaKnown RBP14.74□□□□□ -0.05
CLN8-204ENST00000519254 PIH1D1Q9NWS0 290 aaKnown RBP14.74□□□□□ -0.05
CLN8-204ENST00000519254 ZNF212Q9UDV6 495 aa14.74□□□□□ -0.05
CLN8-204ENST00000519254 A0A1W2PPM1 405 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 ARHGAP42A6NI28 874 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 CXorf49A8MYA2 514 aaPredicted RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 H3BQ06 376 aaPredicted RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 MGAT1P26572 445 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 GBP2P32456 591 aaPredicted RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 SESN2P58004 480 aaPredicted RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 CRADDP78560 199 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 SKIV2LQ15477 1246 aaKnown RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 ZSCAN26Q16670 478 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 STEAP4Q687X5 459 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 FOXR1Q6PIV2 292 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 OTOP3Q7RTS5 596 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 LRRC49Q8IUZ0 686 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 KLHDC8BQ8IXV7 354 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 CELF5Q8N6W0 485 aaKnown RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 HJURPQ8NCD3 748 aaPredicted RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 DDI1Q8WTU0 396 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 PPM1EQ8WY54 764 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 SMARCD2Q92925 531 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 RSPRY1Q96DX4 576 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 TMA16Q96EY4 203 aaKnown RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 STAMBPL1Q96FJ0 436 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 ASB16Q96NS5 453 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 TRABDQ9H4I3 376 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 KIF9Q9HAQ2 790 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 KCNK9Q9NPC2 374 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 SMYD2Q9NRG4 433 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 PLK2Q9NYY3 685 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 GDE1Q9NZC3 331 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 CDH7Q9ULB5 785 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 WNT6Q9Y6F9 365 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 NUP210Q8TEM1 1887 aaPredicted RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 MIA3Q5JRA6 1907 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 SZT2Q5T011 3432 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 A0A1B0GVM2 712 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 GMNCA6NCL1 334 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 TCAF2A6NFQ2 919 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 ERI2A8K979 691 aaKnown RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 KRT15P19012 456 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 SP100P23497 879 aaPredicted RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 NDST2P52849 883 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 CDH4P55283 916 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 C5orf22Q49AR2 442 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 TRMT10BQ6PF06 316 aaKnown RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 FAM217AQ8IXS0 508 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 CARNMT1Q8N4J0 409 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 OR52K1Q8NGK4 314 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 GSDMBQ8TAX9 411 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 OXNAD1Q96HP4 312 aaPredicted RBP14.73□□□□□ -0.05
CLN8-204ENST00000519254 MSLNLQ96KJ4 702 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 POMKQ9H5K3 350 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 CASS4Q9NQ75 786 aa14.73□□□□□ -0.05
CLN8-204ENST00000519254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.72□□□□□ -0.05
CLN8-204ENST00000519254 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.72□□□□□ -0.05
CLN8-204ENST00000519254 H0Y626 953 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 RAMP2O60895 175 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 USP12O75317 370 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 CLDN11O75508 207 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 PEX11BO96011 259 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 MTHFRP42898 656 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 MAPKAPK2P49137 400 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 ZNF177Q13360 481 aaPredicted RBP14.72□□□□□ -0.05
CLN8-204ENST00000519254 TTC39BQ5VTQ0 682 aaPredicted RBP14.72□□□□□ -0.05
CLN8-204ENST00000519254 CPXM2Q8N436 756 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 HMCESQ96FZ2 354 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 LRRC3BQ96PB8 259 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 MYADMQ96S97 322 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 CCT8L2Q96SF2 557 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 CDX2Q99626 313 aaPredicted RBP14.72□□□□□ -0.05
CLN8-204ENST00000519254 LINC00597Q9H2U6 94 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 CCDC134Q9H6E4 229 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 SYBUQ9NX95 663 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 DONSONQ9NYP3 566 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 MOCS1Q9NZB8 636 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 SENP1Q9P0U3 644 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 IPO11Q9UI26 975 aaKnown RBP14.72□□□□□ -0.05
CLN8-204ENST00000519254 MYLKQ15746 1914 aa14.72□□□□□ -0.05
CLN8-204ENST00000519254 FAM159BA6NKW6 160 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 RHOCP08134 193 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 COL19A1Q14993 1142 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 POLD3Q15054 466 aaPredicted RBP14.71□□□□□ -0.05
CLN8-204ENST00000519254 TIGD7Q6NT04 549 aaPredicted RBP14.71□□□□□ -0.05
CLN8-204ENST00000519254 CYS1Q717R9 158 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 CHST9Q7L1S5 443 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 PPM1NQ8N819 430 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 ANKRD42Q8N9B4 389 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 SMRP1Q8NCR6 262 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 GLOD4Q9HC38 313 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 UBP1Q9NZI7 540 aa14.71□□□□□ -0.05
CLN8-204ENST00000519254 TBC1D14Q9P2M4 693 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms