RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 PCED1AQ9H1Q7 454 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 IL36AQ9UHA7 158 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 FZD4Q9ULV1 537 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 HPCAL4Q9UM19 191 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.71□□□□□ -0.53
VCAN-212ENST00000515397 BZW2Q9Y6E2 419 aaKnown RBP11.71□□□□□ -0.53
VCAN-212ENST00000515397 SCINQ9Y6U3 715 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.54
VCAN-212ENST00000515397 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.54
VCAN-212ENST00000515397 KRIT1O00522 736 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 INSIG1O15503 277 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 CBFA2T2O43439 604 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 PLRG1O43660 514 aaKnown RBP11.7□□□□□ -0.54
VCAN-212ENST00000515397 RNGTTO60942 597 aaKnown RBP11.7□□□□□ -0.54
VCAN-212ENST00000515397 GJB3O75712 270 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 TMCC1O94876 653 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 PCDH8O95206 1070 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 ADRB1P08588 477 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 DESP17661 470 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 ERCC2P18074 760 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 ITIH2P19823 946 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 AMPD1P23109 780 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 ETFBP38117 255 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 PAPOLAP51003 745 aaKnown RBP11.7□□□□□ -0.54
VCAN-212ENST00000515397 CLCN6P51797 869 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 CYTH1Q15438 398 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 ATP13A4Q4VNC1 1196 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 LRRC73Q5JTD7 316 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 SPECC1LQ69YQ0 1117 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 ARHGAP36Q6ZRI8 547 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 PIP4P1Q86T03 277 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 VSTM4Q8IW00 320 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 TMIEQ8NEW7 156 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 SETD7Q8WTS6 366 aaKnown RBP11.7□□□□□ -0.54
VCAN-212ENST00000515397 EXOC2Q96KP1 924 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 CCDC114Q96M63 670 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 HEPHQ9BQS7 1158 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 CATSPERBQ9H7T0 1116 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 MRPL47Q9HD33 250 aaKnown RBP11.7□□□□□ -0.54
VCAN-212ENST00000515397 FZD3Q9NPG1 666 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 DYRK4Q9NR20 520 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 ETNK2Q9NVF9 386 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 DNAAF2Q9NVR5 837 aaKnown RBP11.7□□□□□ -0.54
VCAN-212ENST00000515397 CWC15Q9P013 229 aaKnown RBP11.7□□□□□ -0.54
VCAN-212ENST00000515397 ANAPC7Q9UJX3 599 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 ACACBO00763 2458 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 PCDH15Q96QU1 1955 aa11.7□□□□□ -0.54
VCAN-212ENST00000515397 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 WASH4PA8MWX3 477 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 H0Y8X5 98 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 DFFAO00273 331 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 ALOX15BO15296 676 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 PRNPP04156 253 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 CYP1A2P05177 515 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 TPM3P06753 285 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 MYBL1P10243 752 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 GJC1P36383 396 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 CCR5P51681 352 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 C21orf59P57076 290 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 RACK1P63244 317 aaKnown RBP11.69□□□□□ -0.54
VCAN-212ENST00000515397 SIM1P81133 766 aaPredicted RBP11.69□□□□□ -0.54
VCAN-212ENST00000515397 SERINC3Q13530 473 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 TEAD4Q15561 434 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 MYLK3Q32MK0 819 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 SEL1L3Q68CR1 1132 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 KDM7AQ6ZMT4 941 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 RFX8Q6ZV50 586 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 ERN2Q76MJ5 926 aaKnown RBP11.69□□□□□ -0.54
VCAN-212ENST00000515397 UMODL1-AS1Q8N2C9 162 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 PCDH20Q8N6Y1 951 aaKnown RBP11.69□□□□□ -0.54
VCAN-212ENST00000515397 OR8K1Q8NGG5 319 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 VOPP1Q96AW1 172 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 CEP44Q9C0F1 390 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 GGT7Q9UJ14 662 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 ZFR2Q9UPR6 939 aaKnown RBP11.69□□□□□ -0.54
VCAN-212ENST00000515397 ITM2BQ9Y287 266 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 BTBD3Q9Y2F9 522 aa11.69□□□□□ -0.54
VCAN-212ENST00000515397 A0A1W2PR77 199 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
VCAN-212ENST00000515397 C16orf96A6NNT2 1141 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 TMEM110-MUSTN1A8MSY1 372 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 C10orf142B7Z368 130 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 UGT2B4P06133 528 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 RARAP10276 462 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 CEACAM1P13688 526 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 CSRP1P21291 193 aaKnown RBP11.68□□□□□ -0.54
VCAN-212ENST00000515397 CD38P28907 300 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 AIF1P55008 147 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 CLDN2P57739 230 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 YBEYP58557 167 aaPredicted RBP11.68□□□□□ -0.54
VCAN-212ENST00000515397 RHOAP61586 193 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 SEMG2Q02383 582 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 FOXC1Q12948 553 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
VCAN-212ENST00000515397 FBXL19Q6PCT2 694 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 PARS2Q7L3T8 475 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms