RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ABCE1P61221 599 aaKnown RBP13.3□□□□□ -0.28
TCOF1-213ENST00000514442 CRADDP78560 199 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 CDH17Q12864 832 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 MYLPFQ96A32 169 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 C7orf26Q96N11 449 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 DEPDC7Q96QD5 511 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 COG5Q9UP83 839 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 ZNF862O60290 1169 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 GLP2RO95838 553 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 ZNF280AP59817 542 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-213ENST00000514442 CCDC81Q6ZN84 652 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 CAMK1DQ8IU85 385 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 DHRSXQ8N5I4 330 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 FNDC8Q8TC99 324 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
TCOF1-213ENST00000514442 OR12D3Q9UGF7 316 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 TRUB2O95900 331 aaKnown RBP13.3□□□□□ -0.28
TCOF1-213ENST00000514442 MT-CO1P00395 513 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 ITGB6P18564 788 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 NOS2P35228 1153 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 CRYBB1P53674 252 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-213ENST00000514442 RNF19BQ6ZMZ0 732 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 MRPL9Q9BYD2 267 aaKnown RBP13.3□□□□□ -0.28
TCOF1-213ENST00000514442 TBC1D13Q9NVG8 400 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 ACOT9Q9Y305 439 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 IPPQ9Y573 584 aa13.3□□□□□ -0.28
TCOF1-213ENST00000514442 TRAFD1O14545 582 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 PORP16435 677 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 GRM5P41594 1212 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 BRCC3P46736 316 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 NR2C2P49116 596 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 JAG1P78504 1218 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 DLG1Q12959 904 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 CYP1B1Q16678 543 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 FAM110CQ1W6H9 321 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SPDYE7PQ495Y7 208 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 KCNMB4Q86W47 210 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 PHF13Q86YI8 300 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SEC14L1Q92503 715 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 DRG1Q9Y295 367 aaKnown RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 RGPD2P0DJD1 1756 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SNED1Q8TER0 1413 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 BOLA2-SMG1P6H3BVE0 249 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SIN3BO75182 1162 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 BAIAP3O94812 1187 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 WDR47O94967 919 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 VAPBO95292 243 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 CRTAMO95727 393 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 MZF1P28698 734 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 IFNA8P32881 189 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SLC18A1P54219 525 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SUN5Q8TC36 379 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 TUBGCP3Q96CW5 907 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 RTKNQ9BST9 563 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 H3BSA7 217 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 LZTS3O60299 673 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 PIAS1O75925 651 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 CST3P01034 146 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SERPINF2P08697 491 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 MAP3K10Q02779 954 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SLC35G1Q2M3R5 365 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 ABRAXAS1Q6UWZ7 409 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 JOSD2Q8TAC2 188 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 PANX3Q96QZ0 392 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 VPS9D1Q9Y2B5 631 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 SLC27A5Q9Y2P5 690 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 TOPAZ1Q8N9V7 1692 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 ERI2A8K979 691 aaKnown RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 TREHO43280 583 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-213ENST00000514442 JAM2P57087 298 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 FKBP1BP68106 108 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 ADAM17P78536 824 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 C6orf183Q5T699 404 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 ITIH5Q86UX2 942 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 C12orf56Q8IXR9 622 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 GPR152Q8TDT2 470 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 CLPBQ9H078 707 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 MARCH2Q9P0N8 246 aa13.29□□□□□ -0.28
TCOF1-213ENST00000514442 KANSL1LA0AUZ9 987 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 PSMB4P28070 264 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 KCNK10P57789 538 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 SDE2Q6IQ49 451 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ZBTB46Q86UZ6 589 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 EPS8L2Q9H6S3 715 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 WRAP73Q9P2S5 460 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-213ENST00000514442 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 SLIT2O94813 1529 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 A8MX80 341 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 NT5C1B-RDH14C9J2C7 533 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 TRDMT1O14717 391 aaKnown RBP13.28□□□□□ -0.28
TCOF1-213ENST00000514442 OR6B1O95007 311 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 KRT6CP48668 564 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 UGT3A1Q6NUS8 523 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 CYP2R1Q6VVX0 501 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ANKRD23Q86SG2 305 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 ANKRD52Q8NB46 1076 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 TAMM41Q96BW9 452 aa13.28□□□□□ -0.28
TCOF1-213ENST00000514442 MECRQ9BV79 373 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms