RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 OR2A12Q8NGT7 310 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 FOXD4L4Q8WXT5 416 aaPredicted RBP10.12□□□□□ -0.79
NEDD9-210ENST00000505589 SLC35C1Q96A29 364 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 MYEOVQ96EZ4 313 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 C1orf74Q96LT6 269 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 GSDMAQ96QA5 445 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 MYOCQ99972 504 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 HEPHQ9BQS7 1158 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 BOCQ9BWV1 1114 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 RETREG1Q9H6L5 497 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 GPR27Q9NS67 375 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 STARD5Q9NSY2 213 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 DDIT4Q9NX09 232 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 CA5BQ9Y2D0 317 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 OR51B4Q9Y5P0 310 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 LY6G6EA0A0G2JKS1 128 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 A0A1W2PQ27 194 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 A0A1W2PQ64 194 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 TMEM110-MUSTN1A8MSY1 372 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 LMO7DNF2Z398 122 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 RNF225M0QZC1 329 aaPredicted RBP10.11□□□□□ -0.79
NEDD9-210ENST00000505589 MUSKO15146 869 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 SUV39H1O43463 412 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 HSF2BPO75031 334 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 PPFIA2O75334 1257 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 GABBR2O75899 941 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 F9P00740 461 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ALPIP09923 528 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 JMJD7P0C870 316 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ADRB3P13945 408 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ITGB7P26010 798 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 L1CAMP32004 1257 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ETFBP38117 255 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 PRCPP42785 496 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 NDUFA8P51970 172 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 GEMIN4P57678 1058 aaKnown RBP10.11□□□□□ -0.79
NEDD9-210ENST00000505589 CLDN2P57739 230 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 CENPCQ03188 943 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 FZD2Q14332 565 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ZNF542PQ5EBM4 170 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 BRMS1LQ5PSV4 323 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 MANEAQ5SRI9 462 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 FAXCQ5TGI0 409 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 GUSBP11Q6P575 273 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ZDHHC17Q8IUH5 632 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 PCDH20Q8N6Y1 951 aaKnown RBP10.11□□□□□ -0.79
NEDD9-210ENST00000505589 DCAF4L2Q8NA75 395 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ATL2Q8NHH9 583 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ZNF606Q8WXB4 792 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ARRDC3Q96B67 414 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 PRR11Q96HE9 360 aaPredicted RBP10.11□□□□□ -0.79
NEDD9-210ENST00000505589 CEP63Q96MT8 703 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 GFM1Q96RP9 751 aaKnown RBP10.11□□□□□ -0.79
NEDD9-210ENST00000505589 CMKLR1Q99788 373 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 CCDC3Q9BQI4 270 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 B3GNT4Q9C0J1 378 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 FZD3Q9NPG1 666 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 AKAP7Q9P0M2 348 aaPredicted RBP10.11□□□□□ -0.79
NEDD9-210ENST00000505589 XPO7Q9UIA9 1087 aaKnown RBP10.11□□□□□ -0.79
NEDD9-210ENST00000505589 VANGL2Q9ULK5 521 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 PADI4Q9UM07 663 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 ZFR2Q9UPR6 939 aaKnown RBP10.11□□□□□ -0.79
NEDD9-210ENST00000505589 U3KQA8 63 aa10.11□□□□□ -0.79
NEDD9-210ENST00000505589 POM121BA6NF01 834 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 E5RJQ4 531 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
NEDD9-210ENST00000505589 PSMA7O14818 248 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 LEFTY1O75610 366 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 LETM1O95202 739 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-210ENST00000505589 CTSLP07711 333 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 LIPCP11150 499 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 KRT5P13647 590 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 CTSEP14091 401 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 SLC5A2P31639 672 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 PEX5P50542 639 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 METAP1P53582 386 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 ADKP55263 362 aaKnown RBP10.1□□□□□ -0.79
NEDD9-210ENST00000505589 RAD51Q06609 339 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 SRSF1Q07955 248 aaKnown RBP eCLIP10.1□□□□□ -0.79
NEDD9-210ENST00000505589 DEFB133Q30KQ1 61 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 CCDC40Q4G0X9 1142 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 CARD16Q5EG05 197 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 ANKRD40Q6AI12 368 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 GKN2Q86XP6 184 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 JAMLQ86YT9 394 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 DEFB106AQ8N104 65 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 ISG20Q96AZ6 181 aaKnown RBP10.1□□□□□ -0.79
NEDD9-210ENST00000505589 DHTKD1Q96HY7 919 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-210ENST00000505589 C1QTNF2Q9BXJ5 285 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 SIK2Q9H0K1 926 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 SLC25A18Q9H1K4 315 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 ADNPQ9H2P0 1102 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 APOBEC3BQ9UH17 382 aaKnown RBP10.1□□□□□ -0.79
NEDD9-210ENST00000505589 STAP1Q9ULZ2 295 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 CNTN6Q9UQ52 1028 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 FADS3Q9Y5Q0 445 aa10.1□□□□□ -0.79
NEDD9-210ENST00000505589 TDRD6O60522 2096 aaKnown RBP10.1□□□□□ -0.79
NEDD9-210ENST00000505589 SYNJ2BP-COX16A0A087WUM0 186 aa10.09□□□□□ -0.79
NEDD9-210ENST00000505589 A0A1W2PQC6 194 aa10.09□□□□□ -0.79
NEDD9-210ENST00000505589 ILVBLA1L0T0 632 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms